Gene : Tp57577_TGAC_v2_gene5800 T. pratense v2
Defline:  (1 of 1) K10768 - alkylated DNA repair protein alkB homolog 6 (ALKBH6) Genomic Order:  1518
Name:  ? Tp57577_TGAC_v2_gene5800 Secondary Identifier:  ? PAC:35964745
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6829 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5800 0.5kb upstream 0.5kb upstream 4788 true Tp57577_TGAC_v2_LG4: 14453332-14458119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 14453332-14453831 Trifolium pratense
Tp57577_TGAC_v2_gene5800 0.5kb downstream 0.5kb downstream 4788 true Tp57577_TGAC_v2_LG4: 14453832-14458619 Trifolium pratense
Tp57577_TGAC_v2_gene5800 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 14458120-14458619 Trifolium pratense
Tp57577_TGAC_v2_gene5800 1.0kb upstream 1.0kb upstream 5288 true Tp57577_TGAC_v2_LG4: 14452832-14458119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 14452832-14453831 Trifolium pratense
Tp57577_TGAC_v2_gene5800 1.0kb downstream 1.0kb downstream 5288 true Tp57577_TGAC_v2_LG4: 14453832-14459119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 14458120-14459119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 2.0kb upstream 2.0kb upstream 6288 true Tp57577_TGAC_v2_LG4: 14451832-14458119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 14451832-14453831 Trifolium pratense
Tp57577_TGAC_v2_gene5800 2.0kb downstream 2.0kb downstream 6288 true Tp57577_TGAC_v2_LG4: 14453832-14460119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 14458120-14460119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 5.0kb upstream 5.0kb upstream 9288 true Tp57577_TGAC_v2_LG4: 14448832-14458119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 14448832-14453831 Trifolium pratense
Tp57577_TGAC_v2_gene5800 5.0kb downstream 5.0kb downstream 9288 true Tp57577_TGAC_v2_LG4: 14453832-14463119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 14458120-14463119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 10.0kb upstream 10.0kb upstream 14288 true Tp57577_TGAC_v2_LG4: 14443832-14458119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 14443832-14453831 Trifolium pratense
Tp57577_TGAC_v2_gene5800 10.0kb downstream 10.0kb downstream 14288 true Tp57577_TGAC_v2_LG4: 14453832-14468119 Trifolium pratense
Tp57577_TGAC_v2_gene5800 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 14458120-14468119 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299166 5265 Fabidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain