Gene : Tp57577_TGAC_v2_gene27272 T. pratense v2
Defline:  (1 of 2) PTHR11941:SF48 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL Genomic Order:  940
Name:  ? Tp57577_TGAC_v2_gene27272 Secondary Identifier:  ? PAC:35984076
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7574 Trifolium pratense pathologic  
Tpratense VALDEG-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27272 0.5kb upstream 0.5kb upstream 6003 true Tp57577_TGAC_v2_LG5: 9151616-9157618 Trifolium pratense
Tp57577_TGAC_v2_gene27272 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 9157119-9157618 Trifolium pratense
Tp57577_TGAC_v2_gene27272 0.5kb downstream 0.5kb downstream 6003 true Tp57577_TGAC_v2_LG5: 9151116-9157118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 9151116-9151615 Trifolium pratense
Tp57577_TGAC_v2_gene27272 1.0kb upstream 1.0kb upstream 6503 true Tp57577_TGAC_v2_LG5: 9151616-9158118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 9157119-9158118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 1.0kb downstream 1.0kb downstream 6503 true Tp57577_TGAC_v2_LG5: 9150616-9157118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 9150616-9151615 Trifolium pratense
Tp57577_TGAC_v2_gene27272 2.0kb upstream 2.0kb upstream 7503 true Tp57577_TGAC_v2_LG5: 9151616-9159118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 9157119-9159118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 2.0kb downstream 2.0kb downstream 7503 true Tp57577_TGAC_v2_LG5: 9149616-9157118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 9149616-9151615 Trifolium pratense
Tp57577_TGAC_v2_gene27272 5.0kb upstream 5.0kb upstream 10503 true Tp57577_TGAC_v2_LG5: 9151616-9162118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 9157119-9162118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 5.0kb downstream 5.0kb downstream 10503 true Tp57577_TGAC_v2_LG5: 9146616-9157118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 9146616-9151615 Trifolium pratense
Tp57577_TGAC_v2_gene27272 10.0kb upstream 10.0kb upstream 15503 true Tp57577_TGAC_v2_LG5: 9151616-9167118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 9157119-9167118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 10.0kb downstream 10.0kb downstream 15503 true Tp57577_TGAC_v2_LG5: 9141616-9157118 Trifolium pratense
Tp57577_TGAC_v2_gene27272 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 9141616-9151615 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304034 5265 Fabidae View MSA
124065753 5270 Rosid View MSA
123742938 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain