Gene : Tp57577_TGAC_v2_gene28737 T. pratense v2
Defline:  (1 of 509) PF13041 - PPR repeat family (PPR_2) Genomic Order:  959
Name:  ? Tp57577_TGAC_v2_gene28737 Secondary Identifier:  ? PAC:35983871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28737 0.5kb upstream 0.5kb upstream 3718 true Tp57577_TGAC_v2_LG5: 9342786-9346503 Trifolium pratense
Tp57577_TGAC_v2_gene28737 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 9346004-9346503 Trifolium pratense
Tp57577_TGAC_v2_gene28737 0.5kb downstream 0.5kb downstream 3718 true Tp57577_TGAC_v2_LG5: 9342286-9346003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 9342286-9342785 Trifolium pratense
Tp57577_TGAC_v2_gene28737 1.0kb upstream 1.0kb upstream 4218 true Tp57577_TGAC_v2_LG5: 9342786-9347003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 9346004-9347003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 1.0kb downstream 1.0kb downstream 4218 true Tp57577_TGAC_v2_LG5: 9341786-9346003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 9341786-9342785 Trifolium pratense
Tp57577_TGAC_v2_gene28737 2.0kb upstream 2.0kb upstream 5218 true Tp57577_TGAC_v2_LG5: 9342786-9348003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 9346004-9348003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 2.0kb downstream 2.0kb downstream 5218 true Tp57577_TGAC_v2_LG5: 9340786-9346003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 9340786-9342785 Trifolium pratense
Tp57577_TGAC_v2_gene28737 5.0kb upstream 5.0kb upstream 8218 true Tp57577_TGAC_v2_LG5: 9342786-9351003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 9346004-9351003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 5.0kb downstream 5.0kb downstream 8218 true Tp57577_TGAC_v2_LG5: 9337786-9346003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 9337786-9342785 Trifolium pratense
Tp57577_TGAC_v2_gene28737 10.0kb upstream 10.0kb upstream 13218 true Tp57577_TGAC_v2_LG5: 9342786-9356003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 9346004-9356003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 10.0kb downstream 10.0kb downstream 13218 true Tp57577_TGAC_v2_LG5: 9332786-9346003 Trifolium pratense
Tp57577_TGAC_v2_gene28737 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 9332786-9342785 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301298 5265 Fabidae View MSA
124050377 5270 Rosid View MSA
123739053 5271 Pentapetalae View MSA
122787192 5272 Eudicot View MSA
122046913 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain