Gene : Tp57577_TGAC_v2_gene28727 T. pratense v2
Defline:  (1 of 1) K07999 - matrix metalloproteinase-20 (enamelysin) [EC:3.4.24.-] (MMP20) Genomic Order:  963
Name:  ? Tp57577_TGAC_v2_gene28727 Secondary Identifier:  ? PAC:35983537
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28727 0.5kb upstream 0.5kb upstream 1815 true Tp57577_TGAC_v2_LG5: 9365936-9367750 Trifolium pratense
Tp57577_TGAC_v2_gene28727 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 9367251-9367750 Trifolium pratense
Tp57577_TGAC_v2_gene28727 0.5kb downstream 0.5kb downstream 1815 true Tp57577_TGAC_v2_LG5: 9365436-9367250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 9365436-9365935 Trifolium pratense
Tp57577_TGAC_v2_gene28727 1.0kb upstream 1.0kb upstream 2315 true Tp57577_TGAC_v2_LG5: 9365936-9368250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 9367251-9368250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 1.0kb downstream 1.0kb downstream 2315 true Tp57577_TGAC_v2_LG5: 9364936-9367250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 9364936-9365935 Trifolium pratense
Tp57577_TGAC_v2_gene28727 2.0kb upstream 2.0kb upstream 3315 true Tp57577_TGAC_v2_LG5: 9365936-9369250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 9367251-9369250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 2.0kb downstream 2.0kb downstream 3315 true Tp57577_TGAC_v2_LG5: 9363936-9367250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 9363936-9365935 Trifolium pratense
Tp57577_TGAC_v2_gene28727 5.0kb upstream 5.0kb upstream 6315 true Tp57577_TGAC_v2_LG5: 9365936-9372250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 9367251-9372250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 5.0kb downstream 5.0kb downstream 6315 true Tp57577_TGAC_v2_LG5: 9360936-9367250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 9360936-9365935 Trifolium pratense
Tp57577_TGAC_v2_gene28727 10.0kb upstream 10.0kb upstream 11315 true Tp57577_TGAC_v2_LG5: 9365936-9377250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 9367251-9377250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 10.0kb downstream 10.0kb downstream 11315 true Tp57577_TGAC_v2_LG5: 9355936-9367250 Trifolium pratense
Tp57577_TGAC_v2_gene28727 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 9355936-9365935 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297318 5265 Fabidae View MSA
124070256 5270 Rosid View MSA
123748450 5271 Pentapetalae View MSA
122786815 5272 Eudicot View MSA
122041842 5273 Angiosperm View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain