Gene : Tp57577_TGAC_v2_gene37558 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  656
Name:  ? Tp57577_TGAC_v2_gene37558 Secondary Identifier:  ? PAC:35984655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37558 0.5kb upstream 0.5kb upstream 2821 true Tp57577_TGAC_v2_LG5: 6947139-6949959 Trifolium pratense
Tp57577_TGAC_v2_gene37558 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 6949460-6949959 Trifolium pratense
Tp57577_TGAC_v2_gene37558 0.5kb downstream 0.5kb downstream 2821 true Tp57577_TGAC_v2_LG5: 6946639-6949459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 6946639-6947138 Trifolium pratense
Tp57577_TGAC_v2_gene37558 1.0kb upstream 1.0kb upstream 3321 true Tp57577_TGAC_v2_LG5: 6947139-6950459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 6949460-6950459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 1.0kb downstream 1.0kb downstream 3321 true Tp57577_TGAC_v2_LG5: 6946139-6949459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 6946139-6947138 Trifolium pratense
Tp57577_TGAC_v2_gene37558 2.0kb upstream 2.0kb upstream 4321 true Tp57577_TGAC_v2_LG5: 6947139-6951459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 6949460-6951459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 2.0kb downstream 2.0kb downstream 4321 true Tp57577_TGAC_v2_LG5: 6945139-6949459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 6945139-6947138 Trifolium pratense
Tp57577_TGAC_v2_gene37558 5.0kb upstream 5.0kb upstream 7321 true Tp57577_TGAC_v2_LG5: 6947139-6954459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 6949460-6954459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 5.0kb downstream 5.0kb downstream 7321 true Tp57577_TGAC_v2_LG5: 6942139-6949459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 6942139-6947138 Trifolium pratense
Tp57577_TGAC_v2_gene37558 10.0kb upstream 10.0kb upstream 12321 true Tp57577_TGAC_v2_LG5: 6947139-6959459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 6949460-6959459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 10.0kb downstream 10.0kb downstream 12321 true Tp57577_TGAC_v2_LG5: 6937139-6949459 Trifolium pratense
Tp57577_TGAC_v2_gene37558 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 6937139-6947138 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
122301081 5265 Fabidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain