Gene : Tp57577_TGAC_v2_gene38394 T. pratense v2
Defline:  (1 of 7) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Genomic Order:  1198
Name:  ? Tp57577_TGAC_v2_gene38394 Secondary Identifier:  ? PAC:35984253
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPASYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6367 Trifolium pratense pathologic  
Tpratense PWY-7039 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38394 0.5kb upstream 0.5kb upstream 5929 true Tp57577_TGAC_v2_LG5: 11667230-11673158 Trifolium pratense
Tp57577_TGAC_v2_gene38394 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG5: 11672659-11673158 Trifolium pratense
Tp57577_TGAC_v2_gene38394 0.5kb downstream 0.5kb downstream 5929 true Tp57577_TGAC_v2_LG5: 11666730-11672658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG5: 11666730-11667229 Trifolium pratense
Tp57577_TGAC_v2_gene38394 1.0kb upstream 1.0kb upstream 6429 true Tp57577_TGAC_v2_LG5: 11667230-11673658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG5: 11672659-11673658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 1.0kb downstream 1.0kb downstream 6429 true Tp57577_TGAC_v2_LG5: 11666230-11672658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG5: 11666230-11667229 Trifolium pratense
Tp57577_TGAC_v2_gene38394 2.0kb upstream 2.0kb upstream 7429 true Tp57577_TGAC_v2_LG5: 11667230-11674658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG5: 11672659-11674658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 2.0kb downstream 2.0kb downstream 7429 true Tp57577_TGAC_v2_LG5: 11665230-11672658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG5: 11665230-11667229 Trifolium pratense
Tp57577_TGAC_v2_gene38394 5.0kb upstream 5.0kb upstream 10429 true Tp57577_TGAC_v2_LG5: 11667230-11677658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG5: 11672659-11677658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 5.0kb downstream 5.0kb downstream 10429 true Tp57577_TGAC_v2_LG5: 11662230-11672658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG5: 11662230-11667229 Trifolium pratense
Tp57577_TGAC_v2_gene38394 10.0kb upstream 10.0kb upstream 15429 true Tp57577_TGAC_v2_LG5: 11667230-11682658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG5: 11672659-11682658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 10.0kb downstream 10.0kb downstream 15429 true Tp57577_TGAC_v2_LG5: 11657230-11672658 Trifolium pratense
Tp57577_TGAC_v2_gene38394 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG5: 11657230-11667229 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308312 5265 Fabidae View MSA
124071120 5270 Rosid View MSA
123747360 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain