Gene : Tp57577_TGAC_v2_gene10189 T. pratense v2
Defline:  (1 of 4) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  2390
Name:  ? Tp57577_TGAC_v2_gene10189 Secondary Identifier:  ? PAC:35974161
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6352 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10189 0.5kb upstream 0.5kb upstream 5005 true Tp57577_TGAC_v2_LG6: 20457978-20462982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 20457978-20458477 Trifolium pratense
Tp57577_TGAC_v2_gene10189 0.5kb downstream 0.5kb downstream 5005 true Tp57577_TGAC_v2_LG6: 20458478-20463482 Trifolium pratense
Tp57577_TGAC_v2_gene10189 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 20462983-20463482 Trifolium pratense
Tp57577_TGAC_v2_gene10189 1.0kb upstream 1.0kb upstream 5505 true Tp57577_TGAC_v2_LG6: 20457478-20462982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 20457478-20458477 Trifolium pratense
Tp57577_TGAC_v2_gene10189 1.0kb downstream 1.0kb downstream 5505 true Tp57577_TGAC_v2_LG6: 20458478-20463982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 20462983-20463982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 2.0kb upstream 2.0kb upstream 6505 true Tp57577_TGAC_v2_LG6: 20456478-20462982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 20456478-20458477 Trifolium pratense
Tp57577_TGAC_v2_gene10189 2.0kb downstream 2.0kb downstream 6505 true Tp57577_TGAC_v2_LG6: 20458478-20464982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 20462983-20464982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 5.0kb upstream 5.0kb upstream 9505 true Tp57577_TGAC_v2_LG6: 20453478-20462982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 20453478-20458477 Trifolium pratense
Tp57577_TGAC_v2_gene10189 5.0kb downstream 5.0kb downstream 9505 true Tp57577_TGAC_v2_LG6: 20458478-20467982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 20462983-20467982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 10.0kb upstream 10.0kb upstream 14505 true Tp57577_TGAC_v2_LG6: 20448478-20462982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 20448478-20458477 Trifolium pratense
Tp57577_TGAC_v2_gene10189 10.0kb downstream 10.0kb downstream 14505 true Tp57577_TGAC_v2_LG6: 20458478-20472982 Trifolium pratense
Tp57577_TGAC_v2_gene10189 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 20462983-20472982 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314429 5265 Fabidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain