Gene : Tp57577_TGAC_v2_gene1624 T. pratense v2
Defline:  (1 of 48) K01051 - pectinesterase (E3.1.1.11) Genomic Order:  354
Name:  ? Tp57577_TGAC_v2_gene1624 Secondary Identifier:  ? PAC:35974125
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1624 0.5kb upstream 0.5kb upstream 2945 true Tp57577_TGAC_v2_LG6: 2787867-2790811 Trifolium pratense
Tp57577_TGAC_v2_gene1624 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 2790312-2790811 Trifolium pratense
Tp57577_TGAC_v2_gene1624 0.5kb downstream 0.5kb downstream 2945 true Tp57577_TGAC_v2_LG6: 2787367-2790311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 2787367-2787866 Trifolium pratense
Tp57577_TGAC_v2_gene1624 1.0kb upstream 1.0kb upstream 3445 true Tp57577_TGAC_v2_LG6: 2787867-2791311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 2790312-2791311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 1.0kb downstream 1.0kb downstream 3445 true Tp57577_TGAC_v2_LG6: 2786867-2790311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 2786867-2787866 Trifolium pratense
Tp57577_TGAC_v2_gene1624 2.0kb upstream 2.0kb upstream 4445 true Tp57577_TGAC_v2_LG6: 2787867-2792311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 2790312-2792311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 2.0kb downstream 2.0kb downstream 4445 true Tp57577_TGAC_v2_LG6: 2785867-2790311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 2785867-2787866 Trifolium pratense
Tp57577_TGAC_v2_gene1624 5.0kb upstream 5.0kb upstream 7445 true Tp57577_TGAC_v2_LG6: 2787867-2795311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 2790312-2795311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 5.0kb downstream 5.0kb downstream 7445 true Tp57577_TGAC_v2_LG6: 2782867-2790311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 2782867-2787866 Trifolium pratense
Tp57577_TGAC_v2_gene1624 10.0kb upstream 10.0kb upstream 12445 true Tp57577_TGAC_v2_LG6: 2787867-2800311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 2790312-2800311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 10.0kb downstream 10.0kb downstream 12445 true Tp57577_TGAC_v2_LG6: 2777867-2790311 Trifolium pratense
Tp57577_TGAC_v2_gene1624 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 2777867-2787866 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314375 5265 Fabidae View MSA
124071187 5270 Rosid View MSA
123743579 5271 Pentapetalae View MSA
122788004 5272 Eudicot View MSA
122050714 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain