Gene : Tp57577_TGAC_v2_gene18244 T. pratense v2
Defline:  (1 of 2) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  2082
Name:  ? Tp57577_TGAC_v2_gene18244 Secondary Identifier:  ? PAC:35974301
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6118 Trifolium pratense pathologic  
Tpratense PWY-7411 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18244 0.5kb upstream 0.5kb upstream 4159 true Tp57577_TGAC_v2_LG6: 17916810-17920968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 17916810-17917309 Trifolium pratense
Tp57577_TGAC_v2_gene18244 0.5kb downstream 0.5kb downstream 4159 true Tp57577_TGAC_v2_LG6: 17917310-17921468 Trifolium pratense
Tp57577_TGAC_v2_gene18244 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 17920969-17921468 Trifolium pratense
Tp57577_TGAC_v2_gene18244 1.0kb upstream 1.0kb upstream 4659 true Tp57577_TGAC_v2_LG6: 17916310-17920968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 17916310-17917309 Trifolium pratense
Tp57577_TGAC_v2_gene18244 1.0kb downstream 1.0kb downstream 4659 true Tp57577_TGAC_v2_LG6: 17917310-17921968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 17920969-17921968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 2.0kb upstream 2.0kb upstream 5659 true Tp57577_TGAC_v2_LG6: 17915310-17920968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 17915310-17917309 Trifolium pratense
Tp57577_TGAC_v2_gene18244 2.0kb downstream 2.0kb downstream 5659 true Tp57577_TGAC_v2_LG6: 17917310-17922968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 17920969-17922968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 5.0kb upstream 5.0kb upstream 8659 true Tp57577_TGAC_v2_LG6: 17912310-17920968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 17912310-17917309 Trifolium pratense
Tp57577_TGAC_v2_gene18244 5.0kb downstream 5.0kb downstream 8659 true Tp57577_TGAC_v2_LG6: 17917310-17925968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 17920969-17925968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 10.0kb upstream 10.0kb upstream 13659 true Tp57577_TGAC_v2_LG6: 17907310-17920968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 17907310-17917309 Trifolium pratense
Tp57577_TGAC_v2_gene18244 10.0kb downstream 10.0kb downstream 13659 true Tp57577_TGAC_v2_LG6: 17917310-17930968 Trifolium pratense
Tp57577_TGAC_v2_gene18244 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 17920969-17930968 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311810 5265 Fabidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain