Gene : Tp57577_TGAC_v2_gene39062 T. pratense v2
Defline:  (1 of 2) PTHR10302:SF0 - SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  2212
Name:  ? Tp57577_TGAC_v2_gene39062 Secondary Identifier:  ? PAC:35974906
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39062 0.5kb upstream 0.5kb upstream 2197 true Tp57577_TGAC_v2_LG6: 18979191-18981387 Trifolium pratense
Tp57577_TGAC_v2_gene39062 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 18980888-18981387 Trifolium pratense
Tp57577_TGAC_v2_gene39062 0.5kb downstream 0.5kb downstream 2197 true Tp57577_TGAC_v2_LG6: 18978691-18980887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 18978691-18979190 Trifolium pratense
Tp57577_TGAC_v2_gene39062 1.0kb upstream 1.0kb upstream 2697 true Tp57577_TGAC_v2_LG6: 18979191-18981887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 18980888-18981887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 1.0kb downstream 1.0kb downstream 2697 true Tp57577_TGAC_v2_LG6: 18978191-18980887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 18978191-18979190 Trifolium pratense
Tp57577_TGAC_v2_gene39062 2.0kb upstream 2.0kb upstream 3697 true Tp57577_TGAC_v2_LG6: 18979191-18982887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 18980888-18982887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 2.0kb downstream 2.0kb downstream 3697 true Tp57577_TGAC_v2_LG6: 18977191-18980887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 18977191-18979190 Trifolium pratense
Tp57577_TGAC_v2_gene39062 5.0kb upstream 5.0kb upstream 6697 true Tp57577_TGAC_v2_LG6: 18979191-18985887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 18980888-18985887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 5.0kb downstream 5.0kb downstream 6697 true Tp57577_TGAC_v2_LG6: 18974191-18980887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 18974191-18979190 Trifolium pratense
Tp57577_TGAC_v2_gene39062 10.0kb upstream 10.0kb upstream 11697 true Tp57577_TGAC_v2_LG6: 18979191-18990887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 18980888-18990887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 10.0kb downstream 10.0kb downstream 11697 true Tp57577_TGAC_v2_LG6: 18969191-18980887 Trifolium pratense
Tp57577_TGAC_v2_gene39062 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 18969191-18979190 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302373 5265 Fabidae View MSA
124070752 5270 Rosid View MSA
123745269 5271 Pentapetalae View MSA
122793973 5272 Eudicot View MSA
122048956 5273 Angiosperm View MSA
121345230 5274 Embryophyte View MSA
123425647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain