Gene : Tp57577_TGAC_v2_gene4069 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  663
Name:  ? Tp57577_TGAC_v2_gene4069 Secondary Identifier:  ? PAC:35974422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4069 0.5kb upstream 0.5kb upstream 5005 true Tp57577_TGAC_v2_LG6: 5298884-5303888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 5298884-5299383 Trifolium pratense
Tp57577_TGAC_v2_gene4069 0.5kb downstream 0.5kb downstream 5005 true Tp57577_TGAC_v2_LG6: 5299384-5304388 Trifolium pratense
Tp57577_TGAC_v2_gene4069 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 5303889-5304388 Trifolium pratense
Tp57577_TGAC_v2_gene4069 1.0kb upstream 1.0kb upstream 5505 true Tp57577_TGAC_v2_LG6: 5298384-5303888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 5298384-5299383 Trifolium pratense
Tp57577_TGAC_v2_gene4069 1.0kb downstream 1.0kb downstream 5505 true Tp57577_TGAC_v2_LG6: 5299384-5304888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 5303889-5304888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 2.0kb upstream 2.0kb upstream 6505 true Tp57577_TGAC_v2_LG6: 5297384-5303888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 5297384-5299383 Trifolium pratense
Tp57577_TGAC_v2_gene4069 2.0kb downstream 2.0kb downstream 6505 true Tp57577_TGAC_v2_LG6: 5299384-5305888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 5303889-5305888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 5.0kb upstream 5.0kb upstream 9505 true Tp57577_TGAC_v2_LG6: 5294384-5303888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 5294384-5299383 Trifolium pratense
Tp57577_TGAC_v2_gene4069 5.0kb downstream 5.0kb downstream 9505 true Tp57577_TGAC_v2_LG6: 5299384-5308888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 5303889-5308888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 10.0kb upstream 10.0kb upstream 14505 true Tp57577_TGAC_v2_LG6: 5289384-5303888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 5289384-5299383 Trifolium pratense
Tp57577_TGAC_v2_gene4069 10.0kb downstream 10.0kb downstream 14505 true Tp57577_TGAC_v2_LG6: 5299384-5313888 Trifolium pratense
Tp57577_TGAC_v2_gene4069 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 5303889-5313888 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308338 5265 Fabidae View MSA
124061532 5270 Rosid View MSA
123741129 5271 Pentapetalae View MSA
122786104 5272 Eudicot View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain