Gene : Tp57577_TGAC_v2_gene4712 T. pratense v2
Defline:  (1 of 2) PTHR10666//PTHR10666:SF138 - UBIQUITIN // SUBFAMILY NOT NAMED Genomic Order:  72
Name:  ? Tp57577_TGAC_v2_gene4712 Secondary Identifier:  ? PAC:35975966
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6352 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4712 0.5kb upstream 0.5kb upstream 3824 true Tp57577_TGAC_v2_LG6: 460142-463965 Trifolium pratense
Tp57577_TGAC_v2_gene4712 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 463466-463965 Trifolium pratense
Tp57577_TGAC_v2_gene4712 0.5kb downstream 0.5kb downstream 3824 true Tp57577_TGAC_v2_LG6: 459642-463465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 459642-460141 Trifolium pratense
Tp57577_TGAC_v2_gene4712 1.0kb upstream 1.0kb upstream 4324 true Tp57577_TGAC_v2_LG6: 460142-464465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 463466-464465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 1.0kb downstream 1.0kb downstream 4324 true Tp57577_TGAC_v2_LG6: 459142-463465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 459142-460141 Trifolium pratense
Tp57577_TGAC_v2_gene4712 2.0kb upstream 2.0kb upstream 5324 true Tp57577_TGAC_v2_LG6: 460142-465465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 463466-465465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 2.0kb downstream 2.0kb downstream 5324 true Tp57577_TGAC_v2_LG6: 458142-463465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 458142-460141 Trifolium pratense
Tp57577_TGAC_v2_gene4712 5.0kb upstream 5.0kb upstream 8324 true Tp57577_TGAC_v2_LG6: 460142-468465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 463466-468465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 5.0kb downstream 5.0kb downstream 8324 true Tp57577_TGAC_v2_LG6: 455142-463465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 455142-460141 Trifolium pratense
Tp57577_TGAC_v2_gene4712 10.0kb upstream 10.0kb upstream 13324 true Tp57577_TGAC_v2_LG6: 460142-473465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 463466-473465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 10.0kb downstream 10.0kb downstream 13324 true Tp57577_TGAC_v2_LG6: 450142-463465 Trifolium pratense
Tp57577_TGAC_v2_gene4712 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 450142-460141 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain