Gene : Tp57577_TGAC_v2_gene6943 T. pratense v2
Defline:  (1 of 1) PTHR12817 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B Genomic Order:  437
Name:  ? Tp57577_TGAC_v2_gene6943 Secondary Identifier:  ? PAC:35974131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6943 0.5kb upstream 0.5kb upstream 3269 true Tp57577_TGAC_v2_LG6: 3474013-3477281 Trifolium pratense
Tp57577_TGAC_v2_gene6943 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 3476782-3477281 Trifolium pratense
Tp57577_TGAC_v2_gene6943 0.5kb downstream 0.5kb downstream 3269 true Tp57577_TGAC_v2_LG6: 3473513-3476781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 3473513-3474012 Trifolium pratense
Tp57577_TGAC_v2_gene6943 1.0kb upstream 1.0kb upstream 3769 true Tp57577_TGAC_v2_LG6: 3474013-3477781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 3476782-3477781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 1.0kb downstream 1.0kb downstream 3769 true Tp57577_TGAC_v2_LG6: 3473013-3476781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 3473013-3474012 Trifolium pratense
Tp57577_TGAC_v2_gene6943 2.0kb upstream 2.0kb upstream 4769 true Tp57577_TGAC_v2_LG6: 3474013-3478781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 3476782-3478781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 2.0kb downstream 2.0kb downstream 4769 true Tp57577_TGAC_v2_LG6: 3472013-3476781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 3472013-3474012 Trifolium pratense
Tp57577_TGAC_v2_gene6943 5.0kb upstream 5.0kb upstream 7769 true Tp57577_TGAC_v2_LG6: 3474013-3481781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 3476782-3481781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 5.0kb downstream 5.0kb downstream 7769 true Tp57577_TGAC_v2_LG6: 3469013-3476781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 3469013-3474012 Trifolium pratense
Tp57577_TGAC_v2_gene6943 10.0kb upstream 10.0kb upstream 12769 true Tp57577_TGAC_v2_LG6: 3474013-3486781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 3476782-3486781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 10.0kb downstream 10.0kb downstream 12769 true Tp57577_TGAC_v2_LG6: 3464013-3476781 Trifolium pratense
Tp57577_TGAC_v2_gene6943 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 3464013-3474012 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302338 5265 Fabidae View MSA
124063659 5270 Rosid View MSA
123746706 5271 Pentapetalae View MSA
122792651 5272 Eudicot View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain