Gene : Tp57577_TGAC_v2_gene5906 T. pratense v2
Defline:  (1 of 2) PTHR11909:SF131 - CASEIN KINASE-LIKE PROTEIN-RELATED Genomic Order:  1612
Name:  ? Tp57577_TGAC_v2_gene5906 Secondary Identifier:  ? PAC:35976115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5906 0.5kb upstream 0.5kb upstream 8659 true Tp57577_TGAC_v2_LG6: 13349521-13358179 Trifolium pratense
Tp57577_TGAC_v2_gene5906 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 13357680-13358179 Trifolium pratense
Tp57577_TGAC_v2_gene5906 0.5kb downstream 0.5kb downstream 8659 true Tp57577_TGAC_v2_LG6: 13349021-13357679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 13349021-13349520 Trifolium pratense
Tp57577_TGAC_v2_gene5906 1.0kb upstream 1.0kb upstream 9159 true Tp57577_TGAC_v2_LG6: 13349521-13358679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 13357680-13358679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 1.0kb downstream 1.0kb downstream 9159 true Tp57577_TGAC_v2_LG6: 13348521-13357679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 13348521-13349520 Trifolium pratense
Tp57577_TGAC_v2_gene5906 2.0kb upstream 2.0kb upstream 10159 true Tp57577_TGAC_v2_LG6: 13349521-13359679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 13357680-13359679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 2.0kb downstream 2.0kb downstream 10159 true Tp57577_TGAC_v2_LG6: 13347521-13357679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 13347521-13349520 Trifolium pratense
Tp57577_TGAC_v2_gene5906 5.0kb upstream 5.0kb upstream 13159 true Tp57577_TGAC_v2_LG6: 13349521-13362679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 13357680-13362679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 5.0kb downstream 5.0kb downstream 13159 true Tp57577_TGAC_v2_LG6: 13344521-13357679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 13344521-13349520 Trifolium pratense
Tp57577_TGAC_v2_gene5906 10.0kb upstream 10.0kb upstream 18159 true Tp57577_TGAC_v2_LG6: 13349521-13367679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 13357680-13367679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 10.0kb downstream 10.0kb downstream 18159 true Tp57577_TGAC_v2_LG6: 13339521-13357679 Trifolium pratense
Tp57577_TGAC_v2_gene5906 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 13339521-13349520 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122308851 5265 Fabidae View MSA
124066133 5270 Rosid View MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain