Gene : Tp57577_TGAC_v2_gene7895 T. pratense v2
Defline:  (1 of 1) PF00078//PF03732//PF13650 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) Genomic Order:  599
Name:  ? Tp57577_TGAC_v2_gene7895 Secondary Identifier:  ? PAC:35974592
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7895 0.5kb upstream 0.5kb upstream 5759 true Tp57577_TGAC_v2_LG6: 4720752-4726510 Trifolium pratense
Tp57577_TGAC_v2_gene7895 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG6: 4726011-4726510 Trifolium pratense
Tp57577_TGAC_v2_gene7895 0.5kb downstream 0.5kb downstream 5759 true Tp57577_TGAC_v2_LG6: 4720252-4726010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG6: 4720252-4720751 Trifolium pratense
Tp57577_TGAC_v2_gene7895 1.0kb upstream 1.0kb upstream 6259 true Tp57577_TGAC_v2_LG6: 4720752-4727010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG6: 4726011-4727010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 1.0kb downstream 1.0kb downstream 6259 true Tp57577_TGAC_v2_LG6: 4719752-4726010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG6: 4719752-4720751 Trifolium pratense
Tp57577_TGAC_v2_gene7895 2.0kb upstream 2.0kb upstream 7259 true Tp57577_TGAC_v2_LG6: 4720752-4728010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG6: 4726011-4728010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 2.0kb downstream 2.0kb downstream 7259 true Tp57577_TGAC_v2_LG6: 4718752-4726010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG6: 4718752-4720751 Trifolium pratense
Tp57577_TGAC_v2_gene7895 5.0kb upstream 5.0kb upstream 10259 true Tp57577_TGAC_v2_LG6: 4720752-4731010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG6: 4726011-4731010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 5.0kb downstream 5.0kb downstream 10259 true Tp57577_TGAC_v2_LG6: 4715752-4726010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG6: 4715752-4720751 Trifolium pratense
Tp57577_TGAC_v2_gene7895 10.0kb upstream 10.0kb upstream 15259 true Tp57577_TGAC_v2_LG6: 4720752-4736010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG6: 4726011-4736010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 10.0kb downstream 10.0kb downstream 15259 true Tp57577_TGAC_v2_LG6: 4710752-4726010 Trifolium pratense
Tp57577_TGAC_v2_gene7895 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG6: 4710752-4720751 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314887 5265 Fabidae View MSA
124073273 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain