Gene : Tp57577_TGAC_v2_gene12327 T. pratense v2
Defline:  (1 of 71) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  1307
Name:  ? Tp57577_TGAC_v2_gene12327 Secondary Identifier:  ? PAC:35957930
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12327 0.5kb upstream 0.5kb upstream 1958 true Tp57577_TGAC_v2_LG7: 10230133-10232090 Trifolium pratense
Tp57577_TGAC_v2_gene12327 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10231591-10232090 Trifolium pratense
Tp57577_TGAC_v2_gene12327 0.5kb downstream 0.5kb downstream 1958 true Tp57577_TGAC_v2_LG7: 10229633-10231590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10229633-10230132 Trifolium pratense
Tp57577_TGAC_v2_gene12327 1.0kb upstream 1.0kb upstream 2458 true Tp57577_TGAC_v2_LG7: 10230133-10232590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10231591-10232590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 1.0kb downstream 1.0kb downstream 2458 true Tp57577_TGAC_v2_LG7: 10229133-10231590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10229133-10230132 Trifolium pratense
Tp57577_TGAC_v2_gene12327 2.0kb upstream 2.0kb upstream 3458 true Tp57577_TGAC_v2_LG7: 10230133-10233590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10231591-10233590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 2.0kb downstream 2.0kb downstream 3458 true Tp57577_TGAC_v2_LG7: 10228133-10231590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10228133-10230132 Trifolium pratense
Tp57577_TGAC_v2_gene12327 5.0kb upstream 5.0kb upstream 6458 true Tp57577_TGAC_v2_LG7: 10230133-10236590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10231591-10236590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 5.0kb downstream 5.0kb downstream 6458 true Tp57577_TGAC_v2_LG7: 10225133-10231590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10225133-10230132 Trifolium pratense
Tp57577_TGAC_v2_gene12327 10.0kb upstream 10.0kb upstream 11458 true Tp57577_TGAC_v2_LG7: 10230133-10241590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10231591-10241590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 10.0kb downstream 10.0kb downstream 11458 true Tp57577_TGAC_v2_LG7: 10220133-10231590 Trifolium pratense
Tp57577_TGAC_v2_gene12327 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10220133-10230132 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298158 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain