Gene : Tp57577_TGAC_v2_gene13106 T. pratense v2
Defline:  (1 of 3) K00981 - phosphatidate cytidylyltransferase (E2.7.7.41, CDS1, CDS2, cdsA) Genomic Order:  2179
Name:  ? Tp57577_TGAC_v2_gene13106 Secondary Identifier:  ? PAC:35957073
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY0-1319 Trifolium pratense pathologic  
Tpratense PWY4FS-7 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13106 0.5kb upstream 0.5kb upstream 6431 true Tp57577_TGAC_v2_LG7: 18563136-18569566 Trifolium pratense
Tp57577_TGAC_v2_gene13106 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 18569067-18569566 Trifolium pratense
Tp57577_TGAC_v2_gene13106 0.5kb downstream 0.5kb downstream 6431 true Tp57577_TGAC_v2_LG7: 18562636-18569066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 18562636-18563135 Trifolium pratense
Tp57577_TGAC_v2_gene13106 1.0kb upstream 1.0kb upstream 6931 true Tp57577_TGAC_v2_LG7: 18563136-18570066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 18569067-18570066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 1.0kb downstream 1.0kb downstream 6931 true Tp57577_TGAC_v2_LG7: 18562136-18569066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 18562136-18563135 Trifolium pratense
Tp57577_TGAC_v2_gene13106 2.0kb upstream 2.0kb upstream 7931 true Tp57577_TGAC_v2_LG7: 18563136-18571066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 18569067-18571066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 2.0kb downstream 2.0kb downstream 7931 true Tp57577_TGAC_v2_LG7: 18561136-18569066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 18561136-18563135 Trifolium pratense
Tp57577_TGAC_v2_gene13106 5.0kb upstream 5.0kb upstream 10931 true Tp57577_TGAC_v2_LG7: 18563136-18574066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 18569067-18574066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 5.0kb downstream 5.0kb downstream 10931 true Tp57577_TGAC_v2_LG7: 18558136-18569066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 18558136-18563135 Trifolium pratense
Tp57577_TGAC_v2_gene13106 10.0kb upstream 10.0kb upstream 15931 true Tp57577_TGAC_v2_LG7: 18563136-18579066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 18569067-18579066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 10.0kb downstream 10.0kb downstream 15931 true Tp57577_TGAC_v2_LG7: 18553136-18569066 Trifolium pratense
Tp57577_TGAC_v2_gene13106 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 18553136-18563135 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302445 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain