Gene : Tp57577_TGAC_v2_gene12438 T. pratense v2
Defline:  (1 of 2) PTHR32018:SF1 - F21M12.27 PROTEIN-RELATED Genomic Order:  1225
Name:  ? Tp57577_TGAC_v2_gene12438 Secondary Identifier:  ? PAC:35957899
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12438 0.5kb upstream 0.5kb upstream 5202 true Tp57577_TGAC_v2_LG7: 9624022-9629223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 9624022-9624521 Trifolium pratense
Tp57577_TGAC_v2_gene12438 0.5kb downstream 0.5kb downstream 5202 true Tp57577_TGAC_v2_LG7: 9624522-9629723 Trifolium pratense
Tp57577_TGAC_v2_gene12438 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 9629224-9629723 Trifolium pratense
Tp57577_TGAC_v2_gene12438 1.0kb upstream 1.0kb upstream 5702 true Tp57577_TGAC_v2_LG7: 9623522-9629223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 9623522-9624521 Trifolium pratense
Tp57577_TGAC_v2_gene12438 1.0kb downstream 1.0kb downstream 5702 true Tp57577_TGAC_v2_LG7: 9624522-9630223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 9629224-9630223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 2.0kb upstream 2.0kb upstream 6702 true Tp57577_TGAC_v2_LG7: 9622522-9629223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 9622522-9624521 Trifolium pratense
Tp57577_TGAC_v2_gene12438 2.0kb downstream 2.0kb downstream 6702 true Tp57577_TGAC_v2_LG7: 9624522-9631223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 9629224-9631223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 5.0kb upstream 5.0kb upstream 9702 true Tp57577_TGAC_v2_LG7: 9619522-9629223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 9619522-9624521 Trifolium pratense
Tp57577_TGAC_v2_gene12438 5.0kb downstream 5.0kb downstream 9702 true Tp57577_TGAC_v2_LG7: 9624522-9634223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 9629224-9634223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 10.0kb upstream 10.0kb upstream 14702 true Tp57577_TGAC_v2_LG7: 9614522-9629223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 9614522-9624521 Trifolium pratense
Tp57577_TGAC_v2_gene12438 10.0kb downstream 10.0kb downstream 14702 true Tp57577_TGAC_v2_LG7: 9624522-9639223 Trifolium pratense
Tp57577_TGAC_v2_gene12438 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 9629224-9639223 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
122296365 5265 Fabidae View MSA
124067836 5270 Rosid View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain