Gene : Tp57577_TGAC_v2_gene12440 T. pratense v2
Defline:  (1 of 2) PTHR22572:SF110 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 2, CHLOROPLASTIC Genomic Order:  1179
Name:  ? Tp57577_TGAC_v2_gene12440 Secondary Identifier:  ? PAC:35956517
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYCOGENSYNTH-PWY Trifolium pratense pathologic  
Tpratense PWY-622 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12440 0.5kb upstream 0.5kb upstream 4732 true Tp57577_TGAC_v2_LG7: 9331992-9336723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 9331992-9332491 Trifolium pratense
Tp57577_TGAC_v2_gene12440 0.5kb downstream 0.5kb downstream 4732 true Tp57577_TGAC_v2_LG7: 9332492-9337223 Trifolium pratense
Tp57577_TGAC_v2_gene12440 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 9336724-9337223 Trifolium pratense
Tp57577_TGAC_v2_gene12440 1.0kb upstream 1.0kb upstream 5232 true Tp57577_TGAC_v2_LG7: 9331492-9336723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 9331492-9332491 Trifolium pratense
Tp57577_TGAC_v2_gene12440 1.0kb downstream 1.0kb downstream 5232 true Tp57577_TGAC_v2_LG7: 9332492-9337723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 9336724-9337723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 2.0kb upstream 2.0kb upstream 6232 true Tp57577_TGAC_v2_LG7: 9330492-9336723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 9330492-9332491 Trifolium pratense
Tp57577_TGAC_v2_gene12440 2.0kb downstream 2.0kb downstream 6232 true Tp57577_TGAC_v2_LG7: 9332492-9338723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 9336724-9338723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 5.0kb upstream 5.0kb upstream 9232 true Tp57577_TGAC_v2_LG7: 9327492-9336723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 9327492-9332491 Trifolium pratense
Tp57577_TGAC_v2_gene12440 5.0kb downstream 5.0kb downstream 9232 true Tp57577_TGAC_v2_LG7: 9332492-9341723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 9336724-9341723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 10.0kb upstream 10.0kb upstream 14232 true Tp57577_TGAC_v2_LG7: 9322492-9336723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 9322492-9332491 Trifolium pratense
Tp57577_TGAC_v2_gene12440 10.0kb downstream 10.0kb downstream 14232 true Tp57577_TGAC_v2_LG7: 9332492-9346723 Trifolium pratense
Tp57577_TGAC_v2_gene12440 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 9336724-9346723 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302213 5265 Fabidae View MSA
124063067 5270 Rosid View MSA
123736648 5271 Pentapetalae View MSA
122795851 5272 Eudicot View MSA
122049948 5273 Angiosperm View MSA
121348030 5274 Embryophyte View MSA
123424085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain