Gene : Tp57577_TGAC_v2_gene16151 T. pratense v2
Defline:  (1 of 3) K01647 - citrate synthase (CS, gltA) Genomic Order:  1381
Name:  ? Tp57577_TGAC_v2_gene16151 Secondary Identifier:  ? PAC:35955062
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYOXYLATE-BYPASS Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5690 Trifolium pratense pathologic  
Tpratense PWY-6549 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16151 0.5kb upstream 0.5kb upstream 7885 true Tp57577_TGAC_v2_LG7: 10798561-10806445 Trifolium pratense
Tp57577_TGAC_v2_gene16151 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 10805946-10806445 Trifolium pratense
Tp57577_TGAC_v2_gene16151 0.5kb downstream 0.5kb downstream 7885 true Tp57577_TGAC_v2_LG7: 10798061-10805945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 10798061-10798560 Trifolium pratense
Tp57577_TGAC_v2_gene16151 1.0kb upstream 1.0kb upstream 8385 true Tp57577_TGAC_v2_LG7: 10798561-10806945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 10805946-10806945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 1.0kb downstream 1.0kb downstream 8385 true Tp57577_TGAC_v2_LG7: 10797561-10805945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 10797561-10798560 Trifolium pratense
Tp57577_TGAC_v2_gene16151 2.0kb upstream 2.0kb upstream 9385 true Tp57577_TGAC_v2_LG7: 10798561-10807945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 10805946-10807945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 2.0kb downstream 2.0kb downstream 9385 true Tp57577_TGAC_v2_LG7: 10796561-10805945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 10796561-10798560 Trifolium pratense
Tp57577_TGAC_v2_gene16151 5.0kb upstream 5.0kb upstream 12385 true Tp57577_TGAC_v2_LG7: 10798561-10810945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 10805946-10810945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 5.0kb downstream 5.0kb downstream 12385 true Tp57577_TGAC_v2_LG7: 10793561-10805945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 10793561-10798560 Trifolium pratense
Tp57577_TGAC_v2_gene16151 10.0kb upstream 10.0kb upstream 17385 true Tp57577_TGAC_v2_LG7: 10798561-10815945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 10805946-10815945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 10.0kb downstream 10.0kb downstream 17385 true Tp57577_TGAC_v2_LG7: 10788561-10805945 Trifolium pratense
Tp57577_TGAC_v2_gene16151 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 10788561-10798560 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
122299814 5265 Fabidae View MSA
124068700 5270 Rosid View MSA
123737684 5271 Pentapetalae View MSA
122792616 5272 Eudicot View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain