Gene : Tp57577_TGAC_v2_gene1388 T. pratense v2
Defline:  (1 of 3) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  873
Name:  ? Tp57577_TGAC_v2_gene1388 Secondary Identifier:  ? PAC:35955251
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1388 0.5kb upstream 0.5kb upstream 5765 true Tp57577_TGAC_v2_LG7: 6659318-6665082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 6659318-6659817 Trifolium pratense
Tp57577_TGAC_v2_gene1388 0.5kb downstream 0.5kb downstream 5765 true Tp57577_TGAC_v2_LG7: 6659818-6665582 Trifolium pratense
Tp57577_TGAC_v2_gene1388 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 6665083-6665582 Trifolium pratense
Tp57577_TGAC_v2_gene1388 1.0kb upstream 1.0kb upstream 6265 true Tp57577_TGAC_v2_LG7: 6658818-6665082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 6658818-6659817 Trifolium pratense
Tp57577_TGAC_v2_gene1388 1.0kb downstream 1.0kb downstream 6265 true Tp57577_TGAC_v2_LG7: 6659818-6666082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 6665083-6666082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 2.0kb upstream 2.0kb upstream 7265 true Tp57577_TGAC_v2_LG7: 6657818-6665082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 6657818-6659817 Trifolium pratense
Tp57577_TGAC_v2_gene1388 2.0kb downstream 2.0kb downstream 7265 true Tp57577_TGAC_v2_LG7: 6659818-6667082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 6665083-6667082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 5.0kb upstream 5.0kb upstream 10265 true Tp57577_TGAC_v2_LG7: 6654818-6665082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 6654818-6659817 Trifolium pratense
Tp57577_TGAC_v2_gene1388 5.0kb downstream 5.0kb downstream 10265 true Tp57577_TGAC_v2_LG7: 6659818-6670082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 6665083-6670082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 10.0kb upstream 10.0kb upstream 15265 true Tp57577_TGAC_v2_LG7: 6649818-6665082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 6649818-6659817 Trifolium pratense
Tp57577_TGAC_v2_gene1388 10.0kb downstream 10.0kb downstream 15265 true Tp57577_TGAC_v2_LG7: 6659818-6675082 Trifolium pratense
Tp57577_TGAC_v2_gene1388 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 6665083-6675082 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314609 5265 Fabidae View MSA
124073208 5270 Rosid View MSA
123756225 5271 Pentapetalae View MSA
122777394 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain