Gene : Tp57577_TGAC_v2_gene19398 T. pratense v2
Defline:  (1 of 2) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  2432
Name:  ? Tp57577_TGAC_v2_gene19398 Secondary Identifier:  ? PAC:35956843
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense HOMOSERSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3001 Trifolium pratense pathologic  
Tpratense PWY-724 Trifolium pratense pathologic  
Tpratense THRESYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19398 0.5kb upstream 0.5kb upstream 4620 true Tp57577_TGAC_v2_LG7: 21422256-21426875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 21422256-21422755 Trifolium pratense
Tp57577_TGAC_v2_gene19398 0.5kb downstream 0.5kb downstream 4620 true Tp57577_TGAC_v2_LG7: 21422756-21427375 Trifolium pratense
Tp57577_TGAC_v2_gene19398 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 21426876-21427375 Trifolium pratense
Tp57577_TGAC_v2_gene19398 1.0kb upstream 1.0kb upstream 5120 true Tp57577_TGAC_v2_LG7: 21421756-21426875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 21421756-21422755 Trifolium pratense
Tp57577_TGAC_v2_gene19398 1.0kb downstream 1.0kb downstream 5120 true Tp57577_TGAC_v2_LG7: 21422756-21427875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 21426876-21427875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 2.0kb upstream 2.0kb upstream 6120 true Tp57577_TGAC_v2_LG7: 21420756-21426875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 21420756-21422755 Trifolium pratense
Tp57577_TGAC_v2_gene19398 2.0kb downstream 2.0kb downstream 6120 true Tp57577_TGAC_v2_LG7: 21422756-21428875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 21426876-21428875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 5.0kb upstream 5.0kb upstream 9120 true Tp57577_TGAC_v2_LG7: 21417756-21426875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 21417756-21422755 Trifolium pratense
Tp57577_TGAC_v2_gene19398 5.0kb downstream 5.0kb downstream 9120 true Tp57577_TGAC_v2_LG7: 21422756-21431875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 21426876-21431875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 10.0kb upstream 10.0kb upstream 14120 true Tp57577_TGAC_v2_LG7: 21412756-21426875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 21412756-21422755 Trifolium pratense
Tp57577_TGAC_v2_gene19398 10.0kb downstream 10.0kb downstream 14120 true Tp57577_TGAC_v2_LG7: 21422756-21436875 Trifolium pratense
Tp57577_TGAC_v2_gene19398 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 21426876-21436875 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305491 5265 Fabidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain