Gene : Tp57577_TGAC_v2_gene24766 T. pratense v2
Defline:  (1 of 1) PF03552//PF05970 - Cellulose synthase (Cellulose_synt) // PIF1-like helicase (PIF1) Genomic Order:  1479
Name:  ? Tp57577_TGAC_v2_gene24766 Secondary Identifier:  ? PAC:35956257
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1001 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24766 0.5kb upstream 0.5kb upstream 7169 true Tp57577_TGAC_v2_LG7: 11696305-11703473 Trifolium pratense
Tp57577_TGAC_v2_gene24766 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 11702974-11703473 Trifolium pratense
Tp57577_TGAC_v2_gene24766 0.5kb downstream 0.5kb downstream 7169 true Tp57577_TGAC_v2_LG7: 11695805-11702973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 11695805-11696304 Trifolium pratense
Tp57577_TGAC_v2_gene24766 1.0kb upstream 1.0kb upstream 7669 true Tp57577_TGAC_v2_LG7: 11696305-11703973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 11702974-11703973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 1.0kb downstream 1.0kb downstream 7669 true Tp57577_TGAC_v2_LG7: 11695305-11702973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 11695305-11696304 Trifolium pratense
Tp57577_TGAC_v2_gene24766 2.0kb upstream 2.0kb upstream 8669 true Tp57577_TGAC_v2_LG7: 11696305-11704973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 11702974-11704973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 2.0kb downstream 2.0kb downstream 8669 true Tp57577_TGAC_v2_LG7: 11694305-11702973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 11694305-11696304 Trifolium pratense
Tp57577_TGAC_v2_gene24766 5.0kb upstream 5.0kb upstream 11669 true Tp57577_TGAC_v2_LG7: 11696305-11707973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 11702974-11707973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 5.0kb downstream 5.0kb downstream 11669 true Tp57577_TGAC_v2_LG7: 11691305-11702973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 11691305-11696304 Trifolium pratense
Tp57577_TGAC_v2_gene24766 10.0kb upstream 10.0kb upstream 16669 true Tp57577_TGAC_v2_LG7: 11696305-11712973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 11702974-11712973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 10.0kb downstream 10.0kb downstream 16669 true Tp57577_TGAC_v2_LG7: 11686305-11702973 Trifolium pratense
Tp57577_TGAC_v2_gene24766 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 11686305-11696304 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122289468 5265 Fabidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain