Gene : Tp57577_TGAC_v2_gene23794 T. pratense v2
Defline:  (1 of 1) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) Genomic Order:  3238
Name:  ? Tp57577_TGAC_v2_gene23794 Secondary Identifier:  ? PAC:35956491
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23794 0.5kb upstream 0.5kb upstream 6566 true Tp57577_TGAC_v2_LG7: 28860413-28866978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 28860413-28860912 Trifolium pratense
Tp57577_TGAC_v2_gene23794 0.5kb downstream 0.5kb downstream 6566 true Tp57577_TGAC_v2_LG7: 28860913-28867478 Trifolium pratense
Tp57577_TGAC_v2_gene23794 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 28866979-28867478 Trifolium pratense
Tp57577_TGAC_v2_gene23794 1.0kb upstream 1.0kb upstream 7066 true Tp57577_TGAC_v2_LG7: 28859913-28866978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 28859913-28860912 Trifolium pratense
Tp57577_TGAC_v2_gene23794 1.0kb downstream 1.0kb downstream 7066 true Tp57577_TGAC_v2_LG7: 28860913-28867978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 28866979-28867978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 2.0kb upstream 2.0kb upstream 8066 true Tp57577_TGAC_v2_LG7: 28858913-28866978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 28858913-28860912 Trifolium pratense
Tp57577_TGAC_v2_gene23794 2.0kb downstream 2.0kb downstream 8066 true Tp57577_TGAC_v2_LG7: 28860913-28868978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 28866979-28868978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 5.0kb upstream 5.0kb upstream 11066 true Tp57577_TGAC_v2_LG7: 28855913-28866978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 28855913-28860912 Trifolium pratense
Tp57577_TGAC_v2_gene23794 5.0kb downstream 5.0kb downstream 11066 true Tp57577_TGAC_v2_LG7: 28860913-28871978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 28866979-28871978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 10.0kb upstream 10.0kb upstream 16066 true Tp57577_TGAC_v2_LG7: 28850913-28866978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 28850913-28860912 Trifolium pratense
Tp57577_TGAC_v2_gene23794 10.0kb downstream 10.0kb downstream 16066 true Tp57577_TGAC_v2_LG7: 28860913-28876978 Trifolium pratense
Tp57577_TGAC_v2_gene23794 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 28866979-28876978 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040967 5273 Angiosperm View MSA
122311224 5265 Fabidae View MSA
124065448 5270 Rosid View MSA
123749867 5271 Pentapetalae View MSA
122796132 5272 Eudicot View MSA
121350779 5274 Embryophyte View MSA
123428117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain