Gene : Tp57577_TGAC_v2_gene30141 T. pratense v2
Defline:  (1 of 2) PF13871//PF13872 - C-terminal domain on Strawberry notch homologue (Helicase_C_4) // P-loop containing NTP hydrolase pore-1 (AAA_34) Genomic Order:  2514
Name:  ? Tp57577_TGAC_v2_gene30141 Secondary Identifier:  ? PAC:35955996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30141 0.5kb upstream 0.5kb upstream 19227 true Tp57577_TGAC_v2_LG7: 22179475-22198701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 22179475-22179974 Trifolium pratense
Tp57577_TGAC_v2_gene30141 0.5kb downstream 0.5kb downstream 19227 true Tp57577_TGAC_v2_LG7: 22179975-22199201 Trifolium pratense
Tp57577_TGAC_v2_gene30141 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 22198702-22199201 Trifolium pratense
Tp57577_TGAC_v2_gene30141 1.0kb upstream 1.0kb upstream 19727 true Tp57577_TGAC_v2_LG7: 22178975-22198701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 22178975-22179974 Trifolium pratense
Tp57577_TGAC_v2_gene30141 1.0kb downstream 1.0kb downstream 19727 true Tp57577_TGAC_v2_LG7: 22179975-22199701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 22198702-22199701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 2.0kb upstream 2.0kb upstream 20727 true Tp57577_TGAC_v2_LG7: 22177975-22198701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 22177975-22179974 Trifolium pratense
Tp57577_TGAC_v2_gene30141 2.0kb downstream 2.0kb downstream 20727 true Tp57577_TGAC_v2_LG7: 22179975-22200701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 22198702-22200701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 5.0kb upstream 5.0kb upstream 23727 true Tp57577_TGAC_v2_LG7: 22174975-22198701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 22174975-22179974 Trifolium pratense
Tp57577_TGAC_v2_gene30141 5.0kb downstream 5.0kb downstream 23727 true Tp57577_TGAC_v2_LG7: 22179975-22203701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 22198702-22203701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 10.0kb upstream 10.0kb upstream 28727 true Tp57577_TGAC_v2_LG7: 22169975-22198701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 22169975-22179974 Trifolium pratense
Tp57577_TGAC_v2_gene30141 10.0kb downstream 10.0kb downstream 28727 true Tp57577_TGAC_v2_LG7: 22179975-22208701 Trifolium pratense
Tp57577_TGAC_v2_gene30141 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 22198702-22208701 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299514 5265 Fabidae View MSA
124065554 5270 Rosid View MSA
123742096 5271 Pentapetalae View MSA
122786510 5272 Eudicot View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain