Gene : Tp57577_TGAC_v2_gene26338 T. pratense v2
Defline:  (1 of 1) K00020 - 3-hydroxyisobutyrate dehydrogenase (E1.1.1.31, mmsB) Genomic Order:  2611
Name:  ? Tp57577_TGAC_v2_gene26338 Secondary Identifier:  ? PAC:35958384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense VALDEG-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26338 0.5kb upstream 0.5kb upstream 5808 true Tp57577_TGAC_v2_LG7: 23035220-23041027 Trifolium pratense
Tp57577_TGAC_v2_gene26338 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 23040528-23041027 Trifolium pratense
Tp57577_TGAC_v2_gene26338 0.5kb downstream 0.5kb downstream 5808 true Tp57577_TGAC_v2_LG7: 23034720-23040527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 23034720-23035219 Trifolium pratense
Tp57577_TGAC_v2_gene26338 1.0kb upstream 1.0kb upstream 6308 true Tp57577_TGAC_v2_LG7: 23035220-23041527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 23040528-23041527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 1.0kb downstream 1.0kb downstream 6308 true Tp57577_TGAC_v2_LG7: 23034220-23040527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 23034220-23035219 Trifolium pratense
Tp57577_TGAC_v2_gene26338 2.0kb upstream 2.0kb upstream 7308 true Tp57577_TGAC_v2_LG7: 23035220-23042527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 23040528-23042527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 2.0kb downstream 2.0kb downstream 7308 true Tp57577_TGAC_v2_LG7: 23033220-23040527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 23033220-23035219 Trifolium pratense
Tp57577_TGAC_v2_gene26338 5.0kb upstream 5.0kb upstream 10308 true Tp57577_TGAC_v2_LG7: 23035220-23045527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 23040528-23045527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 5.0kb downstream 5.0kb downstream 10308 true Tp57577_TGAC_v2_LG7: 23030220-23040527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 23030220-23035219 Trifolium pratense
Tp57577_TGAC_v2_gene26338 10.0kb upstream 10.0kb upstream 15308 true Tp57577_TGAC_v2_LG7: 23035220-23050527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 23040528-23050527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 10.0kb downstream 10.0kb downstream 15308 true Tp57577_TGAC_v2_LG7: 23025220-23040527 Trifolium pratense
Tp57577_TGAC_v2_gene26338 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 23025220-23035219 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300764 5265 Fabidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain