Gene : Tp57577_TGAC_v2_gene34295 T. pratense v2

Defline:  (1 of 7) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  25
Name:  ? Tp57577_TGAC_v2_gene34295 Secondary Identifier:  ? PAC:35955099

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34295 0.5kb upstream 0.5kb upstream 3045 true Tp57577_TGAC_v2_LG7: 150157-153201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 150157-150656 Trifolium pratense
Tp57577_TGAC_v2_gene34295 0.5kb downstream 0.5kb downstream 3045 true Tp57577_TGAC_v2_LG7: 150657-153701 Trifolium pratense
Tp57577_TGAC_v2_gene34295 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 153202-153701 Trifolium pratense
Tp57577_TGAC_v2_gene34295 1.0kb upstream 1.0kb upstream 3545 true Tp57577_TGAC_v2_LG7: 149657-153201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 149657-150656 Trifolium pratense
Tp57577_TGAC_v2_gene34295 1.0kb downstream 1.0kb downstream 3545 true Tp57577_TGAC_v2_LG7: 150657-154201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 153202-154201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 2.0kb upstream 2.0kb upstream 4545 true Tp57577_TGAC_v2_LG7: 148657-153201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 148657-150656 Trifolium pratense
Tp57577_TGAC_v2_gene34295 2.0kb downstream 2.0kb downstream 4545 true Tp57577_TGAC_v2_LG7: 150657-155201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 153202-155201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 5.0kb upstream 5.0kb upstream 7545 true Tp57577_TGAC_v2_LG7: 145657-153201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 145657-150656 Trifolium pratense
Tp57577_TGAC_v2_gene34295 5.0kb downstream 5.0kb downstream 7545 true Tp57577_TGAC_v2_LG7: 150657-158201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 153202-158201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 10.0kb upstream 10.0kb upstream 12545 true Tp57577_TGAC_v2_LG7: 140657-153201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 140657-150656 Trifolium pratense
Tp57577_TGAC_v2_gene34295 10.0kb downstream 10.0kb downstream 12545 true Tp57577_TGAC_v2_LG7: 150657-163201 Trifolium pratense
Tp57577_TGAC_v2_gene34295 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 153202-163201 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301038 5265 Fabidae View MSA
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain