Gene : Tp57577_TGAC_v2_gene3546 T. pratense v2
Defline:  (1 of 8) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  998
Name:  ? Tp57577_TGAC_v2_gene3546 Secondary Identifier:  ? PAC:35958346
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3546 0.5kb upstream 0.5kb upstream 4025 true Tp57577_TGAC_v2_LG7: 7618761-7622785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 7618761-7619260 Trifolium pratense
Tp57577_TGAC_v2_gene3546 0.5kb downstream 0.5kb downstream 4025 true Tp57577_TGAC_v2_LG7: 7619261-7623285 Trifolium pratense
Tp57577_TGAC_v2_gene3546 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 7622786-7623285 Trifolium pratense
Tp57577_TGAC_v2_gene3546 1.0kb upstream 1.0kb upstream 4525 true Tp57577_TGAC_v2_LG7: 7618261-7622785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 7618261-7619260 Trifolium pratense
Tp57577_TGAC_v2_gene3546 1.0kb downstream 1.0kb downstream 4525 true Tp57577_TGAC_v2_LG7: 7619261-7623785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 7622786-7623785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 2.0kb upstream 2.0kb upstream 5525 true Tp57577_TGAC_v2_LG7: 7617261-7622785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 7617261-7619260 Trifolium pratense
Tp57577_TGAC_v2_gene3546 2.0kb downstream 2.0kb downstream 5525 true Tp57577_TGAC_v2_LG7: 7619261-7624785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 7622786-7624785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 5.0kb upstream 5.0kb upstream 8525 true Tp57577_TGAC_v2_LG7: 7614261-7622785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 7614261-7619260 Trifolium pratense
Tp57577_TGAC_v2_gene3546 5.0kb downstream 5.0kb downstream 8525 true Tp57577_TGAC_v2_LG7: 7619261-7627785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 7622786-7627785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 10.0kb upstream 10.0kb upstream 13525 true Tp57577_TGAC_v2_LG7: 7609261-7622785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 7609261-7619260 Trifolium pratense
Tp57577_TGAC_v2_gene3546 10.0kb downstream 10.0kb downstream 13525 true Tp57577_TGAC_v2_LG7: 7619261-7632785 Trifolium pratense
Tp57577_TGAC_v2_gene3546 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 7622786-7632785 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311179 5265 Fabidae View MSA
124070333 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain