Gene : Tp57577_TGAC_v2_gene3550 T. pratense v2
Defline:  (1 of 2) K08955 - ATP-dependent metalloprotease [EC:3.4.24.-] (YME1) Genomic Order:  950
Name:  ? Tp57577_TGAC_v2_gene3550 Secondary Identifier:  ? PAC:35958072
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3550 0.5kb upstream 0.5kb upstream 6597 true Tp57577_TGAC_v2_LG7: 7320614-7327210 Trifolium pratense
Tp57577_TGAC_v2_gene3550 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 7326711-7327210 Trifolium pratense
Tp57577_TGAC_v2_gene3550 0.5kb downstream 0.5kb downstream 6597 true Tp57577_TGAC_v2_LG7: 7320114-7326710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 7320114-7320613 Trifolium pratense
Tp57577_TGAC_v2_gene3550 1.0kb upstream 1.0kb upstream 7097 true Tp57577_TGAC_v2_LG7: 7320614-7327710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 7326711-7327710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 1.0kb downstream 1.0kb downstream 7097 true Tp57577_TGAC_v2_LG7: 7319614-7326710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 7319614-7320613 Trifolium pratense
Tp57577_TGAC_v2_gene3550 2.0kb upstream 2.0kb upstream 8097 true Tp57577_TGAC_v2_LG7: 7320614-7328710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 7326711-7328710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 2.0kb downstream 2.0kb downstream 8097 true Tp57577_TGAC_v2_LG7: 7318614-7326710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 7318614-7320613 Trifolium pratense
Tp57577_TGAC_v2_gene3550 5.0kb upstream 5.0kb upstream 11097 true Tp57577_TGAC_v2_LG7: 7320614-7331710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 7326711-7331710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 5.0kb downstream 5.0kb downstream 11097 true Tp57577_TGAC_v2_LG7: 7315614-7326710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 7315614-7320613 Trifolium pratense
Tp57577_TGAC_v2_gene3550 10.0kb upstream 10.0kb upstream 16097 true Tp57577_TGAC_v2_LG7: 7320614-7336710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 7326711-7336710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 10.0kb downstream 10.0kb downstream 16097 true Tp57577_TGAC_v2_LG7: 7310614-7326710 Trifolium pratense
Tp57577_TGAC_v2_gene3550 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 7310614-7320613 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306895 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain