Gene : Tp57577_TGAC_v2_gene33704 T. pratense v2
Defline:  (1 of 5) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  1882
Name:  ? Tp57577_TGAC_v2_gene33704 Secondary Identifier:  ? PAC:35955491
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33704 0.5kb upstream 0.5kb upstream 3269 true Tp57577_TGAC_v2_LG7: 15460980-15464248 Trifolium pratense
Tp57577_TGAC_v2_gene33704 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 15463749-15464248 Trifolium pratense
Tp57577_TGAC_v2_gene33704 0.5kb downstream 0.5kb downstream 3269 true Tp57577_TGAC_v2_LG7: 15460480-15463748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 15460480-15460979 Trifolium pratense
Tp57577_TGAC_v2_gene33704 1.0kb upstream 1.0kb upstream 3769 true Tp57577_TGAC_v2_LG7: 15460980-15464748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 15463749-15464748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 1.0kb downstream 1.0kb downstream 3769 true Tp57577_TGAC_v2_LG7: 15459980-15463748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 15459980-15460979 Trifolium pratense
Tp57577_TGAC_v2_gene33704 2.0kb upstream 2.0kb upstream 4769 true Tp57577_TGAC_v2_LG7: 15460980-15465748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 15463749-15465748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 2.0kb downstream 2.0kb downstream 4769 true Tp57577_TGAC_v2_LG7: 15458980-15463748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 15458980-15460979 Trifolium pratense
Tp57577_TGAC_v2_gene33704 5.0kb upstream 5.0kb upstream 7769 true Tp57577_TGAC_v2_LG7: 15460980-15468748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 15463749-15468748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 5.0kb downstream 5.0kb downstream 7769 true Tp57577_TGAC_v2_LG7: 15455980-15463748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 15455980-15460979 Trifolium pratense
Tp57577_TGAC_v2_gene33704 10.0kb upstream 10.0kb upstream 12769 true Tp57577_TGAC_v2_LG7: 15460980-15473748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 15463749-15473748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 10.0kb downstream 10.0kb downstream 12769 true Tp57577_TGAC_v2_LG7: 15450980-15463748 Trifolium pratense
Tp57577_TGAC_v2_gene33704 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 15450980-15460979 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309285 5265 Fabidae View MSA
124064346 5270 Rosid View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain