Gene : Tp57577_TGAC_v2_gene38096 T. pratense v2
Defline:  (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) Genomic Order:  668
Name:  ? Tp57577_TGAC_v2_gene38096 Secondary Identifier:  ? PAC:35955509
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38096 0.5kb upstream 0.5kb upstream 16690 true Tp57577_TGAC_v2_LG7: 5075392-5092081 Trifolium pratense
Tp57577_TGAC_v2_gene38096 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 5091582-5092081 Trifolium pratense
Tp57577_TGAC_v2_gene38096 0.5kb downstream 0.5kb downstream 16690 true Tp57577_TGAC_v2_LG7: 5074892-5091581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 5074892-5075391 Trifolium pratense
Tp57577_TGAC_v2_gene38096 1.0kb upstream 1.0kb upstream 17190 true Tp57577_TGAC_v2_LG7: 5075392-5092581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 5091582-5092581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 1.0kb downstream 1.0kb downstream 17190 true Tp57577_TGAC_v2_LG7: 5074392-5091581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 5074392-5075391 Trifolium pratense
Tp57577_TGAC_v2_gene38096 2.0kb upstream 2.0kb upstream 18190 true Tp57577_TGAC_v2_LG7: 5075392-5093581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 5091582-5093581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 2.0kb downstream 2.0kb downstream 18190 true Tp57577_TGAC_v2_LG7: 5073392-5091581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 5073392-5075391 Trifolium pratense
Tp57577_TGAC_v2_gene38096 5.0kb upstream 5.0kb upstream 21190 true Tp57577_TGAC_v2_LG7: 5075392-5096581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 5091582-5096581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 5.0kb downstream 5.0kb downstream 21190 true Tp57577_TGAC_v2_LG7: 5070392-5091581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 5070392-5075391 Trifolium pratense
Tp57577_TGAC_v2_gene38096 10.0kb upstream 10.0kb upstream 26190 true Tp57577_TGAC_v2_LG7: 5075392-5101581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 5091582-5101581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 10.0kb downstream 10.0kb downstream 26190 true Tp57577_TGAC_v2_LG7: 5065392-5091581 Trifolium pratense
Tp57577_TGAC_v2_gene38096 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 5065392-5075391 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312597 5265 Fabidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain