Gene : Tp57577_TGAC_v2_gene3588 T. pratense v2
Defline:  (1 of 1) PTHR11108:SF4 - FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  942
Name:  ? Tp57577_TGAC_v2_gene3588 Secondary Identifier:  ? PAC:35956508
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense HEME-BIOSYNTHESIS-II Trifolium pratense pathologic  
Tpratense PWY-5918 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3588 0.5kb upstream 0.5kb upstream 5758 true Tp57577_TGAC_v2_LG7: 7261318-7267075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 7261318-7261817 Trifolium pratense
Tp57577_TGAC_v2_gene3588 0.5kb downstream 0.5kb downstream 5758 true Tp57577_TGAC_v2_LG7: 7261818-7267575 Trifolium pratense
Tp57577_TGAC_v2_gene3588 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 7267076-7267575 Trifolium pratense
Tp57577_TGAC_v2_gene3588 1.0kb upstream 1.0kb upstream 6258 true Tp57577_TGAC_v2_LG7: 7260818-7267075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 7260818-7261817 Trifolium pratense
Tp57577_TGAC_v2_gene3588 1.0kb downstream 1.0kb downstream 6258 true Tp57577_TGAC_v2_LG7: 7261818-7268075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 7267076-7268075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 2.0kb upstream 2.0kb upstream 7258 true Tp57577_TGAC_v2_LG7: 7259818-7267075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 7259818-7261817 Trifolium pratense
Tp57577_TGAC_v2_gene3588 2.0kb downstream 2.0kb downstream 7258 true Tp57577_TGAC_v2_LG7: 7261818-7269075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 7267076-7269075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 5.0kb upstream 5.0kb upstream 10258 true Tp57577_TGAC_v2_LG7: 7256818-7267075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 7256818-7261817 Trifolium pratense
Tp57577_TGAC_v2_gene3588 5.0kb downstream 5.0kb downstream 10258 true Tp57577_TGAC_v2_LG7: 7261818-7272075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 7267076-7272075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 10.0kb upstream 10.0kb upstream 15258 true Tp57577_TGAC_v2_LG7: 7251818-7267075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 7251818-7261817 Trifolium pratense
Tp57577_TGAC_v2_gene3588 10.0kb downstream 10.0kb downstream 15258 true Tp57577_TGAC_v2_LG7: 7261818-7277075 Trifolium pratense
Tp57577_TGAC_v2_gene3588 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 7267076-7277075 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305462 5265 Fabidae View MSA
124062262 5270 Rosid View MSA
123738607 5271 Pentapetalae View MSA
122786704 5272 Eudicot View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain