Gene : Tp57577_TGAC_v2_gene37181 T. pratense v2
Defline:  (1 of 2) K00606 - 3-methyl-2-oxobutanoate hydroxymethyltransferase (panB) Genomic Order:  246
Name:  ? Tp57577_TGAC_v2_gene37181 Secondary Identifier:  ? PAC:35956122
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PANTO-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37181 0.5kb upstream 0.5kb upstream 3408 true Tp57577_TGAC_v2_LG7: 1696884-1700291 Trifolium pratense
Tp57577_TGAC_v2_gene37181 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 1699792-1700291 Trifolium pratense
Tp57577_TGAC_v2_gene37181 0.5kb downstream 0.5kb downstream 3408 true Tp57577_TGAC_v2_LG7: 1696384-1699791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 1696384-1696883 Trifolium pratense
Tp57577_TGAC_v2_gene37181 1.0kb upstream 1.0kb upstream 3908 true Tp57577_TGAC_v2_LG7: 1696884-1700791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 1699792-1700791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 1.0kb downstream 1.0kb downstream 3908 true Tp57577_TGAC_v2_LG7: 1695884-1699791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 1695884-1696883 Trifolium pratense
Tp57577_TGAC_v2_gene37181 2.0kb upstream 2.0kb upstream 4908 true Tp57577_TGAC_v2_LG7: 1696884-1701791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 1699792-1701791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 2.0kb downstream 2.0kb downstream 4908 true Tp57577_TGAC_v2_LG7: 1694884-1699791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 1694884-1696883 Trifolium pratense
Tp57577_TGAC_v2_gene37181 5.0kb upstream 5.0kb upstream 7908 true Tp57577_TGAC_v2_LG7: 1696884-1704791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 1699792-1704791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 5.0kb downstream 5.0kb downstream 7908 true Tp57577_TGAC_v2_LG7: 1691884-1699791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 1691884-1696883 Trifolium pratense
Tp57577_TGAC_v2_gene37181 10.0kb upstream 10.0kb upstream 12908 true Tp57577_TGAC_v2_LG7: 1696884-1709791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 1699792-1709791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 10.0kb downstream 10.0kb downstream 12908 true Tp57577_TGAC_v2_LG7: 1686884-1699791 Trifolium pratense
Tp57577_TGAC_v2_gene37181 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 1686884-1696883 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301613 5265 Fabidae View MSA
124063716 5270 Rosid View MSA
123736873 5271 Pentapetalae View MSA
122793216 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain