Gene : Tp57577_TGAC_v2_gene38472 T. pratense v2
Defline:  (1 of 3) PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Genomic Order:  323
Name:  ? Tp57577_TGAC_v2_gene38472 Secondary Identifier:  ? PAC:35955707
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38472 0.5kb upstream 0.5kb upstream 3678 true Tp57577_TGAC_v2_LG7: 2407544-2411221 Trifolium pratense
Tp57577_TGAC_v2_gene38472 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 2410722-2411221 Trifolium pratense
Tp57577_TGAC_v2_gene38472 0.5kb downstream 0.5kb downstream 3678 true Tp57577_TGAC_v2_LG7: 2407044-2410721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 2407044-2407543 Trifolium pratense
Tp57577_TGAC_v2_gene38472 1.0kb upstream 1.0kb upstream 4178 true Tp57577_TGAC_v2_LG7: 2407544-2411721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 2410722-2411721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 1.0kb downstream 1.0kb downstream 4178 true Tp57577_TGAC_v2_LG7: 2406544-2410721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 2406544-2407543 Trifolium pratense
Tp57577_TGAC_v2_gene38472 2.0kb upstream 2.0kb upstream 5178 true Tp57577_TGAC_v2_LG7: 2407544-2412721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 2410722-2412721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 2.0kb downstream 2.0kb downstream 5178 true Tp57577_TGAC_v2_LG7: 2405544-2410721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 2405544-2407543 Trifolium pratense
Tp57577_TGAC_v2_gene38472 5.0kb upstream 5.0kb upstream 8178 true Tp57577_TGAC_v2_LG7: 2407544-2415721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 2410722-2415721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 5.0kb downstream 5.0kb downstream 8178 true Tp57577_TGAC_v2_LG7: 2402544-2410721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 2402544-2407543 Trifolium pratense
Tp57577_TGAC_v2_gene38472 10.0kb upstream 10.0kb upstream 13178 true Tp57577_TGAC_v2_LG7: 2407544-2420721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 2410722-2420721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 10.0kb downstream 10.0kb downstream 13178 true Tp57577_TGAC_v2_LG7: 2397544-2410721 Trifolium pratense
Tp57577_TGAC_v2_gene38472 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 2397544-2407543 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308978 5265 Fabidae View MSA
124064081 5270 Rosid View MSA
123738784 5271 Pentapetalae View MSA
122793705 5272 Eudicot View MSA
122046741 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121310651 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain