Gene : Tp57577_TGAC_v2_gene38220 T. pratense v2
Defline:  (1 of 1) 2.1.1.142 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase Genomic Order:  626
Name:  ? Tp57577_TGAC_v2_gene38220 Secondary Identifier:  ? PAC:35956425
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2541 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38220 0.5kb upstream 0.5kb upstream 2086 true Tp57577_TGAC_v2_LG7: 4787796-4789881 Trifolium pratense
Tp57577_TGAC_v2_gene38220 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 4789382-4789881 Trifolium pratense
Tp57577_TGAC_v2_gene38220 0.5kb downstream 0.5kb downstream 2086 true Tp57577_TGAC_v2_LG7: 4787296-4789381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 4787296-4787795 Trifolium pratense
Tp57577_TGAC_v2_gene38220 1.0kb upstream 1.0kb upstream 2586 true Tp57577_TGAC_v2_LG7: 4787796-4790381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 4789382-4790381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 1.0kb downstream 1.0kb downstream 2586 true Tp57577_TGAC_v2_LG7: 4786796-4789381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 4786796-4787795 Trifolium pratense
Tp57577_TGAC_v2_gene38220 2.0kb upstream 2.0kb upstream 3586 true Tp57577_TGAC_v2_LG7: 4787796-4791381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 4789382-4791381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 2.0kb downstream 2.0kb downstream 3586 true Tp57577_TGAC_v2_LG7: 4785796-4789381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 4785796-4787795 Trifolium pratense
Tp57577_TGAC_v2_gene38220 5.0kb upstream 5.0kb upstream 6586 true Tp57577_TGAC_v2_LG7: 4787796-4794381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 4789382-4794381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 5.0kb downstream 5.0kb downstream 6586 true Tp57577_TGAC_v2_LG7: 4782796-4789381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 4782796-4787795 Trifolium pratense
Tp57577_TGAC_v2_gene38220 10.0kb upstream 10.0kb upstream 11586 true Tp57577_TGAC_v2_LG7: 4787796-4799381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 4789382-4799381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 10.0kb downstream 10.0kb downstream 11586 true Tp57577_TGAC_v2_LG7: 4777796-4789381 Trifolium pratense
Tp57577_TGAC_v2_gene38220 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 4777796-4787795 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308371 5265 Fabidae View MSA
124062821 5270 Rosid View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain