Gene : Tp57577_TGAC_v2_gene4472 T. pratense v2
Defline:  (1 of 1) K12251 - N-carbamoylputrescine amidase (aguB) Genomic Order:  464
Name:  ? Tp57577_TGAC_v2_gene4472 Secondary Identifier:  ? PAC:35958099
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-43 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4472 0.5kb upstream 0.5kb upstream 4904 true Tp57577_TGAC_v2_LG7: 3620098-3625001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 3620098-3620597 Trifolium pratense
Tp57577_TGAC_v2_gene4472 0.5kb downstream 0.5kb downstream 4904 true Tp57577_TGAC_v2_LG7: 3620598-3625501 Trifolium pratense
Tp57577_TGAC_v2_gene4472 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 3625002-3625501 Trifolium pratense
Tp57577_TGAC_v2_gene4472 1.0kb upstream 1.0kb upstream 5404 true Tp57577_TGAC_v2_LG7: 3619598-3625001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 3619598-3620597 Trifolium pratense
Tp57577_TGAC_v2_gene4472 1.0kb downstream 1.0kb downstream 5404 true Tp57577_TGAC_v2_LG7: 3620598-3626001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 3625002-3626001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 2.0kb upstream 2.0kb upstream 6404 true Tp57577_TGAC_v2_LG7: 3618598-3625001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 3618598-3620597 Trifolium pratense
Tp57577_TGAC_v2_gene4472 2.0kb downstream 2.0kb downstream 6404 true Tp57577_TGAC_v2_LG7: 3620598-3627001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 3625002-3627001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 5.0kb upstream 5.0kb upstream 9404 true Tp57577_TGAC_v2_LG7: 3615598-3625001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 3615598-3620597 Trifolium pratense
Tp57577_TGAC_v2_gene4472 5.0kb downstream 5.0kb downstream 9404 true Tp57577_TGAC_v2_LG7: 3620598-3630001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 3625002-3630001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 10.0kb upstream 10.0kb upstream 14404 true Tp57577_TGAC_v2_LG7: 3610598-3625001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 3610598-3620597 Trifolium pratense
Tp57577_TGAC_v2_gene4472 10.0kb downstream 10.0kb downstream 14404 true Tp57577_TGAC_v2_LG7: 3620598-3635001 Trifolium pratense
Tp57577_TGAC_v2_gene4472 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 3625002-3635001 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain