Gene : Tp57577_TGAC_v2_gene4208 T. pratense v2
Defline:  (1 of 1) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3162
Name:  ? Tp57577_TGAC_v2_gene4208 Secondary Identifier:  ? PAC:35957117
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4208 0.5kb upstream 0.5kb upstream 2135 true Tp57577_TGAC_v2_LG7: 28297152-28299286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 28297152-28297651 Trifolium pratense
Tp57577_TGAC_v2_gene4208 0.5kb downstream 0.5kb downstream 2135 true Tp57577_TGAC_v2_LG7: 28297652-28299786 Trifolium pratense
Tp57577_TGAC_v2_gene4208 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 28299287-28299786 Trifolium pratense
Tp57577_TGAC_v2_gene4208 1.0kb upstream 1.0kb upstream 2635 true Tp57577_TGAC_v2_LG7: 28296652-28299286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 28296652-28297651 Trifolium pratense
Tp57577_TGAC_v2_gene4208 1.0kb downstream 1.0kb downstream 2635 true Tp57577_TGAC_v2_LG7: 28297652-28300286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 28299287-28300286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 2.0kb upstream 2.0kb upstream 3635 true Tp57577_TGAC_v2_LG7: 28295652-28299286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 28295652-28297651 Trifolium pratense
Tp57577_TGAC_v2_gene4208 2.0kb downstream 2.0kb downstream 3635 true Tp57577_TGAC_v2_LG7: 28297652-28301286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 28299287-28301286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 5.0kb upstream 5.0kb upstream 6635 true Tp57577_TGAC_v2_LG7: 28292652-28299286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 28292652-28297651 Trifolium pratense
Tp57577_TGAC_v2_gene4208 5.0kb downstream 5.0kb downstream 6635 true Tp57577_TGAC_v2_LG7: 28297652-28304286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 28299287-28304286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 10.0kb upstream 10.0kb upstream 11635 true Tp57577_TGAC_v2_LG7: 28287652-28299286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 28287652-28297651 Trifolium pratense
Tp57577_TGAC_v2_gene4208 10.0kb downstream 10.0kb downstream 11635 true Tp57577_TGAC_v2_LG7: 28297652-28309286 Trifolium pratense
Tp57577_TGAC_v2_gene4208 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 28299287-28309286 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303042 5265 Fabidae View MSA
124070455 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain