Gene : Tp57577_TGAC_v2_gene6394 T. pratense v2
Defline:  (1 of 11) PTHR31776:SF0 - ALPHA-L-ARABINOFURANOSIDASE 1-RELATED Genomic Order:  3388
Name:  ? Tp57577_TGAC_v2_gene6394 Secondary Identifier:  ? PAC:35955426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6394 0.5kb upstream 0.5kb upstream 2003 true Tp57577_TGAC_v2_LG7: 30007406-30009408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 30007406-30007905 Trifolium pratense
Tp57577_TGAC_v2_gene6394 0.5kb downstream 0.5kb downstream 2003 true Tp57577_TGAC_v2_LG7: 30007906-30009908 Trifolium pratense
Tp57577_TGAC_v2_gene6394 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 30009409-30009908 Trifolium pratense
Tp57577_TGAC_v2_gene6394 1.0kb upstream 1.0kb upstream 2503 true Tp57577_TGAC_v2_LG7: 30006906-30009408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 30006906-30007905 Trifolium pratense
Tp57577_TGAC_v2_gene6394 1.0kb downstream 1.0kb downstream 2503 true Tp57577_TGAC_v2_LG7: 30007906-30010408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 30009409-30010408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 2.0kb upstream 2.0kb upstream 3503 true Tp57577_TGAC_v2_LG7: 30005906-30009408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 30005906-30007905 Trifolium pratense
Tp57577_TGAC_v2_gene6394 2.0kb downstream 2.0kb downstream 3503 true Tp57577_TGAC_v2_LG7: 30007906-30011408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 30009409-30011408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 5.0kb upstream 5.0kb upstream 6503 true Tp57577_TGAC_v2_LG7: 30002906-30009408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 30002906-30007905 Trifolium pratense
Tp57577_TGAC_v2_gene6394 5.0kb downstream 5.0kb downstream 6503 true Tp57577_TGAC_v2_LG7: 30007906-30014408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 30009409-30014408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 10.0kb upstream 10.0kb upstream 11503 true Tp57577_TGAC_v2_LG7: 29997906-30009408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 29997906-30007905 Trifolium pratense
Tp57577_TGAC_v2_gene6394 10.0kb downstream 10.0kb downstream 11503 true Tp57577_TGAC_v2_LG7: 30007906-30019408 Trifolium pratense
Tp57577_TGAC_v2_gene6394 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 30009409-30019408 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027771 5273 Angiosperm View MSA
122298068 5265 Fabidae View MSA
124038979 5270 Rosid View MSA
123744633 5271 Pentapetalae View MSA
122771182 5272 Eudicot View MSA
121297381 5274 Embryophyte View MSA
123425978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain