Gene : Tp57577_TGAC_v2_gene6414 T. pratense v2
Defline:  (1 of 2) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  3399
Name:  ? Tp57577_TGAC_v2_gene6414 Secondary Identifier:  ? PAC:35956156
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6414 0.5kb upstream 0.5kb upstream 3539 true Tp57577_TGAC_v2_LG7: 30060397-30063935 Trifolium pratense
Tp57577_TGAC_v2_gene6414 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 30063436-30063935 Trifolium pratense
Tp57577_TGAC_v2_gene6414 0.5kb downstream 0.5kb downstream 3539 true Tp57577_TGAC_v2_LG7: 30059897-30063435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 30059897-30060396 Trifolium pratense
Tp57577_TGAC_v2_gene6414 1.0kb upstream 1.0kb upstream 4039 true Tp57577_TGAC_v2_LG7: 30060397-30064435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 30063436-30064435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 1.0kb downstream 1.0kb downstream 4039 true Tp57577_TGAC_v2_LG7: 30059397-30063435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 30059397-30060396 Trifolium pratense
Tp57577_TGAC_v2_gene6414 2.0kb upstream 2.0kb upstream 5039 true Tp57577_TGAC_v2_LG7: 30060397-30065435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 30063436-30065435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 2.0kb downstream 2.0kb downstream 5039 true Tp57577_TGAC_v2_LG7: 30058397-30063435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 30058397-30060396 Trifolium pratense
Tp57577_TGAC_v2_gene6414 5.0kb upstream 5.0kb upstream 8039 true Tp57577_TGAC_v2_LG7: 30060397-30068435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 30063436-30068435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 5.0kb downstream 5.0kb downstream 8039 true Tp57577_TGAC_v2_LG7: 30055397-30063435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 30055397-30060396 Trifolium pratense
Tp57577_TGAC_v2_gene6414 10.0kb upstream 10.0kb upstream 13039 true Tp57577_TGAC_v2_LG7: 30060397-30073435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 30063436-30073435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 10.0kb downstream 10.0kb downstream 13039 true Tp57577_TGAC_v2_LG7: 30050397-30063435 Trifolium pratense
Tp57577_TGAC_v2_gene6414 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 30050397-30060396 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122308200 5265 Fabidae View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain