Gene : Tp57577_TGAC_v2_gene39022 T. pratense v2
Defline:  (1 of 1) PF00365//PF12796 - Phosphofructokinase (PFK) // Ankyrin repeats (3 copies) (Ank_2) Genomic Order:  1042
Name:  ? Tp57577_TGAC_v2_gene39022 Secondary Identifier:  ? PAC:35956610
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ANAEROFRUCAT-PWY Trifolium pratense pathologic  
Tpratense ANAGLYCOLYSIS-PWY Trifolium pratense pathologic  
Tpratense PWY-1042 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39022 0.5kb upstream 0.5kb upstream 13112 true Tp57577_TGAC_v2_LG7: 8085367-8098478 Trifolium pratense
Tp57577_TGAC_v2_gene39022 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 8097979-8098478 Trifolium pratense
Tp57577_TGAC_v2_gene39022 0.5kb downstream 0.5kb downstream 13112 true Tp57577_TGAC_v2_LG7: 8084867-8097978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 8084867-8085366 Trifolium pratense
Tp57577_TGAC_v2_gene39022 1.0kb upstream 1.0kb upstream 13612 true Tp57577_TGAC_v2_LG7: 8085367-8098978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 8097979-8098978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 1.0kb downstream 1.0kb downstream 13612 true Tp57577_TGAC_v2_LG7: 8084367-8097978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 8084367-8085366 Trifolium pratense
Tp57577_TGAC_v2_gene39022 2.0kb upstream 2.0kb upstream 14612 true Tp57577_TGAC_v2_LG7: 8085367-8099978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 8097979-8099978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 2.0kb downstream 2.0kb downstream 14612 true Tp57577_TGAC_v2_LG7: 8083367-8097978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 8083367-8085366 Trifolium pratense
Tp57577_TGAC_v2_gene39022 5.0kb upstream 5.0kb upstream 17612 true Tp57577_TGAC_v2_LG7: 8085367-8102978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 8097979-8102978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 5.0kb downstream 5.0kb downstream 17612 true Tp57577_TGAC_v2_LG7: 8080367-8097978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 8080367-8085366 Trifolium pratense
Tp57577_TGAC_v2_gene39022 10.0kb upstream 10.0kb upstream 22612 true Tp57577_TGAC_v2_LG7: 8085367-8107978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 8097979-8107978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 10.0kb downstream 10.0kb downstream 22612 true Tp57577_TGAC_v2_LG7: 8075367-8097978 Trifolium pratense
Tp57577_TGAC_v2_gene39022 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 8075367-8085366 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122314168 5265 Fabidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain