Gene : Tp57577_TGAC_v2_gene28436 T. pratense v2
Defline:  (1 of 1) K17761 - succinate-semialdehyde dehydrogenase, mitochondrial (SSADH) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene28436 Secondary Identifier:  ? PAC:35983017
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLUDEG-I-PWY Trifolium pratense pathologic  
Tpratense PWY-4321 Trifolium pratense pathologic  
Tpratense PWY-6473 Trifolium pratense pathologic  
Tpratense PWY-6535 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28436 0.5kb upstream 0.5kb upstream 11304 true Tp57577_TGAC_v2_scaf_1027: 16042-27345 Trifolium pratense
Tp57577_TGAC_v2_gene28436 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1027: 26846-27345 Trifolium pratense
Tp57577_TGAC_v2_gene28436 0.5kb downstream 0.5kb downstream 11304 true Tp57577_TGAC_v2_scaf_1027: 15542-26845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1027: 15542-16041 Trifolium pratense
Tp57577_TGAC_v2_gene28436 1.0kb upstream 1.0kb upstream 11804 true Tp57577_TGAC_v2_scaf_1027: 16042-27845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1027: 26846-27845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 1.0kb downstream 1.0kb downstream 11804 true Tp57577_TGAC_v2_scaf_1027: 15042-26845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1027: 15042-16041 Trifolium pratense
Tp57577_TGAC_v2_gene28436 2.0kb upstream 2.0kb upstream 12804 true Tp57577_TGAC_v2_scaf_1027: 16042-28845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1027: 26846-28845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 2.0kb downstream 2.0kb downstream 12804 true Tp57577_TGAC_v2_scaf_1027: 14042-26845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1027: 14042-16041 Trifolium pratense
Tp57577_TGAC_v2_gene28436 5.0kb upstream 5.0kb upstream 15804 true Tp57577_TGAC_v2_scaf_1027: 16042-31845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1027: 26846-31845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 5.0kb downstream 5.0kb downstream 15804 true Tp57577_TGAC_v2_scaf_1027: 11042-26845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1027: 11042-16041 Trifolium pratense
Tp57577_TGAC_v2_gene28436 10.0kb upstream 10.0kb upstream 20804 true Tp57577_TGAC_v2_scaf_1027: 16042-36845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1027: 26846-36845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 10.0kb downstream 10.0kb downstream 20804 true Tp57577_TGAC_v2_scaf_1027: 6042-26845 Trifolium pratense
Tp57577_TGAC_v2_gene28436 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1027: 6042-16041 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303483 5265 Fabidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain