Gene : Tp57577_TGAC_v2_gene28499 T. pratense v2
Defline:  (1 of 1) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene28499 Secondary Identifier:  ? PAC:35951301
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5173 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense PYRUVDEHYD-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28499 0.5kb upstream 0.5kb upstream 8208 true Tp57577_TGAC_v2_scaf_1020: 2223-10430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1020: 2223-2722 Trifolium pratense
Tp57577_TGAC_v2_gene28499 0.5kb downstream 0.5kb downstream 8208 true Tp57577_TGAC_v2_scaf_1020: 2723-10930 Trifolium pratense
Tp57577_TGAC_v2_gene28499 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1020: 10431-10930 Trifolium pratense
Tp57577_TGAC_v2_gene28499 1.0kb upstream 1.0kb upstream 8708 true Tp57577_TGAC_v2_scaf_1020: 1723-10430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1020: 1723-2722 Trifolium pratense
Tp57577_TGAC_v2_gene28499 1.0kb downstream 1.0kb downstream 8708 true Tp57577_TGAC_v2_scaf_1020: 2723-11430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1020: 10431-11430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 2.0kb upstream 2.0kb upstream 9708 true Tp57577_TGAC_v2_scaf_1020: 723-10430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1020: 723-2722 Trifolium pratense
Tp57577_TGAC_v2_gene28499 2.0kb downstream 2.0kb downstream 9708 true Tp57577_TGAC_v2_scaf_1020: 2723-12430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1020: 10431-12430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 5.0kb upstream 5.0kb upstream 10430 true Tp57577_TGAC_v2_scaf_1020: 1-10430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 5.0kb upstream 5.0kb upstream 2722 false Tp57577_TGAC_v2_scaf_1020: 1-2722 Trifolium pratense
Tp57577_TGAC_v2_gene28499 5.0kb downstream 5.0kb downstream 12708 true Tp57577_TGAC_v2_scaf_1020: 2723-15430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1020: 10431-15430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 10.0kb upstream 10.0kb upstream 10430 true Tp57577_TGAC_v2_scaf_1020: 1-10430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 10.0kb upstream 10.0kb upstream 2722 false Tp57577_TGAC_v2_scaf_1020: 1-2722 Trifolium pratense
Tp57577_TGAC_v2_gene28499 10.0kb downstream 10.0kb downstream 17708 true Tp57577_TGAC_v2_scaf_1020: 2723-20430 Trifolium pratense
Tp57577_TGAC_v2_gene28499 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1020: 10431-20430 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302272 5265 Fabidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain