Gene : Tp57577_TGAC_v2_gene24560 T. pratense v2
Defline:  (1 of 4) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene24560 Secondary Identifier:  ? PAC:35953245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24560 0.5kb upstream 0.5kb upstream 3295 true Tp57577_TGAC_v2_scaf_1259: 20146-23440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1259: 20146-20645 Trifolium pratense
Tp57577_TGAC_v2_gene24560 0.5kb downstream 0.5kb downstream 3295 true Tp57577_TGAC_v2_scaf_1259: 20646-23940 Trifolium pratense
Tp57577_TGAC_v2_gene24560 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1259: 23441-23940 Trifolium pratense
Tp57577_TGAC_v2_gene24560 1.0kb upstream 1.0kb upstream 3795 true Tp57577_TGAC_v2_scaf_1259: 19646-23440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1259: 19646-20645 Trifolium pratense
Tp57577_TGAC_v2_gene24560 1.0kb downstream 1.0kb downstream 3795 true Tp57577_TGAC_v2_scaf_1259: 20646-24440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1259: 23441-24440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 2.0kb upstream 2.0kb upstream 4795 true Tp57577_TGAC_v2_scaf_1259: 18646-23440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1259: 18646-20645 Trifolium pratense
Tp57577_TGAC_v2_gene24560 2.0kb downstream 2.0kb downstream 4795 true Tp57577_TGAC_v2_scaf_1259: 20646-25440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1259: 23441-25440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 5.0kb upstream 5.0kb upstream 7795 true Tp57577_TGAC_v2_scaf_1259: 15646-23440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1259: 15646-20645 Trifolium pratense
Tp57577_TGAC_v2_gene24560 5.0kb downstream 5.0kb downstream 7795 true Tp57577_TGAC_v2_scaf_1259: 20646-28440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1259: 23441-28440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 10.0kb upstream 10.0kb upstream 12795 true Tp57577_TGAC_v2_scaf_1259: 10646-23440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1259: 10646-20645 Trifolium pratense
Tp57577_TGAC_v2_gene24560 10.0kb downstream 10.0kb downstream 12795 true Tp57577_TGAC_v2_scaf_1259: 20646-33440 Trifolium pratense
Tp57577_TGAC_v2_gene24560 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1259: 23441-33440 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312358 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain