Gene : Tp57577_TGAC_v2_gene20646 T. pratense v2
Defline:  (1 of 1) PF00059 - Lectin C-type domain (Lectin_C) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene20646 Secondary Identifier:  ? PAC:35982185
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20646 0.5kb upstream 0.5kb upstream 6906 true Tp57577_TGAC_v2_scaf_1205: 8776-15681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1205: 8776-9275 Trifolium pratense
Tp57577_TGAC_v2_gene20646 0.5kb downstream 0.5kb downstream 6906 true Tp57577_TGAC_v2_scaf_1205: 9276-16181 Trifolium pratense
Tp57577_TGAC_v2_gene20646 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1205: 15682-16181 Trifolium pratense
Tp57577_TGAC_v2_gene20646 1.0kb upstream 1.0kb upstream 7406 true Tp57577_TGAC_v2_scaf_1205: 8276-15681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1205: 8276-9275 Trifolium pratense
Tp57577_TGAC_v2_gene20646 1.0kb downstream 1.0kb downstream 7406 true Tp57577_TGAC_v2_scaf_1205: 9276-16681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1205: 15682-16681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 2.0kb upstream 2.0kb upstream 8406 true Tp57577_TGAC_v2_scaf_1205: 7276-15681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1205: 7276-9275 Trifolium pratense
Tp57577_TGAC_v2_gene20646 2.0kb downstream 2.0kb downstream 8406 true Tp57577_TGAC_v2_scaf_1205: 9276-17681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1205: 15682-17681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 5.0kb upstream 5.0kb upstream 11406 true Tp57577_TGAC_v2_scaf_1205: 4276-15681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1205: 4276-9275 Trifolium pratense
Tp57577_TGAC_v2_gene20646 5.0kb downstream 5.0kb downstream 11406 true Tp57577_TGAC_v2_scaf_1205: 9276-20681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1205: 15682-20681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 10.0kb upstream 10.0kb upstream 15681 true Tp57577_TGAC_v2_scaf_1205: 1-15681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 10.0kb upstream 10.0kb upstream 9275 false Tp57577_TGAC_v2_scaf_1205: 1-9275 Trifolium pratense
Tp57577_TGAC_v2_gene20646 10.0kb downstream 10.0kb downstream 16406 true Tp57577_TGAC_v2_scaf_1205: 9276-25681 Trifolium pratense
Tp57577_TGAC_v2_gene20646 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1205: 15682-25681 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308117 5265 Fabidae View MSA
124063336 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain