Gene : Tp57577_TGAC_v2_gene20566 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene20566 Secondary Identifier:  ? PAC:35953793
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20566 0.5kb upstream 0.5kb upstream 3524 true Tp57577_TGAC_v2_scaf_1210: 20812-24335 Trifolium pratense
Tp57577_TGAC_v2_gene20566 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1210: 23836-24335 Trifolium pratense
Tp57577_TGAC_v2_gene20566 0.5kb downstream 0.5kb downstream 3524 true Tp57577_TGAC_v2_scaf_1210: 20312-23835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1210: 20312-20811 Trifolium pratense
Tp57577_TGAC_v2_gene20566 1.0kb upstream 1.0kb upstream 4024 true Tp57577_TGAC_v2_scaf_1210: 20812-24835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1210: 23836-24835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 1.0kb downstream 1.0kb downstream 4024 true Tp57577_TGAC_v2_scaf_1210: 19812-23835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1210: 19812-20811 Trifolium pratense
Tp57577_TGAC_v2_gene20566 2.0kb upstream 2.0kb upstream 5024 true Tp57577_TGAC_v2_scaf_1210: 20812-25835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1210: 23836-25835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 2.0kb downstream 2.0kb downstream 5024 true Tp57577_TGAC_v2_scaf_1210: 18812-23835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1210: 18812-20811 Trifolium pratense
Tp57577_TGAC_v2_gene20566 5.0kb upstream 5.0kb upstream 8024 true Tp57577_TGAC_v2_scaf_1210: 20812-28835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1210: 23836-28835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 5.0kb downstream 5.0kb downstream 8024 true Tp57577_TGAC_v2_scaf_1210: 15812-23835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1210: 15812-20811 Trifolium pratense
Tp57577_TGAC_v2_gene20566 10.0kb upstream 10.0kb upstream 13024 true Tp57577_TGAC_v2_scaf_1210: 20812-33835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1210: 23836-33835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 10.0kb downstream 10.0kb downstream 13024 true Tp57577_TGAC_v2_scaf_1210: 10812-23835 Trifolium pratense
Tp57577_TGAC_v2_gene20566 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1210: 10812-20811 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
122301081 5265 Fabidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain