Gene : Tp57577_TGAC_v2_gene20718 T. pratense v2
Defline:  (1 of 21) PF04844 - Transcriptional repressor, ovate (Ovate) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene20718 Secondary Identifier:  ? PAC:35983186
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20718 0.5kb upstream 0.5kb upstream 1551 true Tp57577_TGAC_v2_scaf_1228: 37165-38715 Trifolium pratense
Tp57577_TGAC_v2_gene20718 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1228: 38216-38715 Trifolium pratense
Tp57577_TGAC_v2_gene20718 0.5kb downstream 0.5kb downstream 1551 true Tp57577_TGAC_v2_scaf_1228: 36665-38215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1228: 36665-37164 Trifolium pratense
Tp57577_TGAC_v2_gene20718 1.0kb upstream 1.0kb upstream 2051 true Tp57577_TGAC_v2_scaf_1228: 37165-39215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1228: 38216-39215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 1.0kb downstream 1.0kb downstream 2051 true Tp57577_TGAC_v2_scaf_1228: 36165-38215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1228: 36165-37164 Trifolium pratense
Tp57577_TGAC_v2_gene20718 2.0kb upstream 2.0kb upstream 2834 true Tp57577_TGAC_v2_scaf_1228: 37165-39998 Trifolium pratense
Tp57577_TGAC_v2_gene20718 2.0kb upstream 2.0kb upstream 1783 false Tp57577_TGAC_v2_scaf_1228: 38216-39998 Trifolium pratense
Tp57577_TGAC_v2_gene20718 2.0kb downstream 2.0kb downstream 3051 true Tp57577_TGAC_v2_scaf_1228: 35165-38215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1228: 35165-37164 Trifolium pratense
Tp57577_TGAC_v2_gene20718 5.0kb upstream 5.0kb upstream 2834 true Tp57577_TGAC_v2_scaf_1228: 37165-39998 Trifolium pratense
Tp57577_TGAC_v2_gene20718 5.0kb upstream 5.0kb upstream 1783 false Tp57577_TGAC_v2_scaf_1228: 38216-39998 Trifolium pratense
Tp57577_TGAC_v2_gene20718 5.0kb downstream 5.0kb downstream 6051 true Tp57577_TGAC_v2_scaf_1228: 32165-38215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1228: 32165-37164 Trifolium pratense
Tp57577_TGAC_v2_gene20718 10.0kb upstream 10.0kb upstream 2834 true Tp57577_TGAC_v2_scaf_1228: 37165-39998 Trifolium pratense
Tp57577_TGAC_v2_gene20718 10.0kb upstream 10.0kb upstream 1783 false Tp57577_TGAC_v2_scaf_1228: 38216-39998 Trifolium pratense
Tp57577_TGAC_v2_gene20718 10.0kb downstream 10.0kb downstream 11051 true Tp57577_TGAC_v2_scaf_1228: 27165-38215 Trifolium pratense
Tp57577_TGAC_v2_gene20718 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1228: 27165-37164 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310269 5265 Fabidae View MSA
124071458 5270 Rosid View MSA
123749654 5271 Pentapetalae View MSA
122787439 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain