Gene : Tp57577_TGAC_v2_gene3960 T. pratense v2
Defline:  (1 of 37) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene3960 Secondary Identifier:  ? PAC:35959175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3960 0.5kb upstream 0.5kb upstream 1727 true Tp57577_TGAC_v2_scaf_1905: 2879-4605 Trifolium pratense
Tp57577_TGAC_v2_gene3960 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1905: 4106-4605 Trifolium pratense
Tp57577_TGAC_v2_gene3960 0.5kb downstream 0.5kb downstream 1727 true Tp57577_TGAC_v2_scaf_1905: 2379-4105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1905: 2379-2878 Trifolium pratense
Tp57577_TGAC_v2_gene3960 1.0kb upstream 1.0kb upstream 2227 true Tp57577_TGAC_v2_scaf_1905: 2879-5105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1905: 4106-5105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 1.0kb downstream 1.0kb downstream 2227 true Tp57577_TGAC_v2_scaf_1905: 1879-4105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1905: 1879-2878 Trifolium pratense
Tp57577_TGAC_v2_gene3960 2.0kb upstream 2.0kb upstream 3227 true Tp57577_TGAC_v2_scaf_1905: 2879-6105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1905: 4106-6105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 2.0kb downstream 2.0kb downstream 3227 true Tp57577_TGAC_v2_scaf_1905: 879-4105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1905: 879-2878 Trifolium pratense
Tp57577_TGAC_v2_gene3960 5.0kb upstream 5.0kb upstream 6227 true Tp57577_TGAC_v2_scaf_1905: 2879-9105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1905: 4106-9105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 5.0kb downstream 5.0kb downstream 4105 true Tp57577_TGAC_v2_scaf_1905: 1-4105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 5.0kb downstream 5.0kb downstream 2878 false Tp57577_TGAC_v2_scaf_1905: 1-2878 Trifolium pratense
Tp57577_TGAC_v2_gene3960 10.0kb upstream 10.0kb upstream 7420 true Tp57577_TGAC_v2_scaf_1905: 2879-10298 Trifolium pratense
Tp57577_TGAC_v2_gene3960 10.0kb upstream 10.0kb upstream 6193 false Tp57577_TGAC_v2_scaf_1905: 4106-10298 Trifolium pratense
Tp57577_TGAC_v2_gene3960 10.0kb downstream 10.0kb downstream 4105 true Tp57577_TGAC_v2_scaf_1905: 1-4105 Trifolium pratense
Tp57577_TGAC_v2_gene3960 10.0kb downstream 10.0kb downstream 2878 false Tp57577_TGAC_v2_scaf_1905: 1-2878 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288017 5265 Fabidae View MSA
124028404 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain