Gene : Tp57577_TGAC_v2_gene30959 T. pratense v2
Defline:  (1 of 509) PF13041 - PPR repeat family (PPR_2) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene30959 Secondary Identifier:  ? PAC:35982871
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30959 0.5kb upstream 0.5kb upstream 6262 true Tp57577_TGAC_v2_scaf_782: 24304-30565 Trifolium pratense
Tp57577_TGAC_v2_gene30959 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_782: 30066-30565 Trifolium pratense
Tp57577_TGAC_v2_gene30959 0.5kb downstream 0.5kb downstream 6262 true Tp57577_TGAC_v2_scaf_782: 23804-30065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_782: 23804-24303 Trifolium pratense
Tp57577_TGAC_v2_gene30959 1.0kb upstream 1.0kb upstream 6762 true Tp57577_TGAC_v2_scaf_782: 24304-31065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_782: 30066-31065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 1.0kb downstream 1.0kb downstream 6762 true Tp57577_TGAC_v2_scaf_782: 23304-30065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_782: 23304-24303 Trifolium pratense
Tp57577_TGAC_v2_gene30959 2.0kb upstream 2.0kb upstream 7762 true Tp57577_TGAC_v2_scaf_782: 24304-32065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_782: 30066-32065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 2.0kb downstream 2.0kb downstream 7762 true Tp57577_TGAC_v2_scaf_782: 22304-30065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_782: 22304-24303 Trifolium pratense
Tp57577_TGAC_v2_gene30959 5.0kb upstream 5.0kb upstream 10762 true Tp57577_TGAC_v2_scaf_782: 24304-35065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_782: 30066-35065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 5.0kb downstream 5.0kb downstream 10762 true Tp57577_TGAC_v2_scaf_782: 19304-30065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_782: 19304-24303 Trifolium pratense
Tp57577_TGAC_v2_gene30959 10.0kb upstream 10.0kb upstream 15762 true Tp57577_TGAC_v2_scaf_782: 24304-40065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_782: 30066-40065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 10.0kb downstream 10.0kb downstream 15762 true Tp57577_TGAC_v2_scaf_782: 14304-30065 Trifolium pratense
Tp57577_TGAC_v2_gene30959 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_782: 14304-24303 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304408 5265 Fabidae View MSA
124068324 5270 Rosid View MSA
123737648 5271 Pentapetalae View MSA
122793672 5272 Eudicot View MSA
122045784 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain