Gene : Tp57577_TGAC_v2_gene16977 T. pratense v2
Defline:  (1 of 3) K01369 - legumain (LGMN) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene16977 Secondary Identifier:  ? PAC:35952207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16977 0.5kb upstream 0.5kb upstream 4916 true Tp57577_TGAC_v2_scaf_2659: 183-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 0.5kb upstream 0.5kb upstream 52 false Tp57577_TGAC_v2_scaf_2659: 5047-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 0.5kb downstream 0.5kb downstream 5046 true Tp57577_TGAC_v2_scaf_2659: 1-5046 Trifolium pratense
Tp57577_TGAC_v2_gene16977 0.5kb downstream 0.5kb downstream 182 false Tp57577_TGAC_v2_scaf_2659: 1-182 Trifolium pratense
Tp57577_TGAC_v2_gene16977 1.0kb upstream 1.0kb upstream 4916 true Tp57577_TGAC_v2_scaf_2659: 183-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 1.0kb upstream 1.0kb upstream 52 false Tp57577_TGAC_v2_scaf_2659: 5047-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 1.0kb downstream 1.0kb downstream 5046 true Tp57577_TGAC_v2_scaf_2659: 1-5046 Trifolium pratense
Tp57577_TGAC_v2_gene16977 1.0kb downstream 1.0kb downstream 182 false Tp57577_TGAC_v2_scaf_2659: 1-182 Trifolium pratense
Tp57577_TGAC_v2_gene16977 2.0kb upstream 2.0kb upstream 4916 true Tp57577_TGAC_v2_scaf_2659: 183-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 2.0kb upstream 2.0kb upstream 52 false Tp57577_TGAC_v2_scaf_2659: 5047-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 2.0kb downstream 2.0kb downstream 5046 true Tp57577_TGAC_v2_scaf_2659: 1-5046 Trifolium pratense
Tp57577_TGAC_v2_gene16977 2.0kb downstream 2.0kb downstream 182 false Tp57577_TGAC_v2_scaf_2659: 1-182 Trifolium pratense
Tp57577_TGAC_v2_gene16977 5.0kb upstream 5.0kb upstream 4916 true Tp57577_TGAC_v2_scaf_2659: 183-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 5.0kb upstream 5.0kb upstream 52 false Tp57577_TGAC_v2_scaf_2659: 5047-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 5.0kb downstream 5.0kb downstream 5046 true Tp57577_TGAC_v2_scaf_2659: 1-5046 Trifolium pratense
Tp57577_TGAC_v2_gene16977 5.0kb downstream 5.0kb downstream 182 false Tp57577_TGAC_v2_scaf_2659: 1-182 Trifolium pratense
Tp57577_TGAC_v2_gene16977 10.0kb upstream 10.0kb upstream 4916 true Tp57577_TGAC_v2_scaf_2659: 183-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 10.0kb upstream 10.0kb upstream 52 false Tp57577_TGAC_v2_scaf_2659: 5047-5098 Trifolium pratense
Tp57577_TGAC_v2_gene16977 10.0kb downstream 10.0kb downstream 5046 true Tp57577_TGAC_v2_scaf_2659: 1-5046 Trifolium pratense
Tp57577_TGAC_v2_gene16977 10.0kb downstream 10.0kb downstream 182 false Tp57577_TGAC_v2_scaf_2659: 1-182 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296659 5265 Fabidae View MSA
124075132 5270 Rosid View MSA
123743278 5271 Pentapetalae View MSA
122791730 5272 Eudicot View MSA
122046408 5273 Angiosperm View MSA
121350664 5274 Embryophyte View MSA
123428632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain