Gene : Tp57577_TGAC_v2_gene14958 T. pratense v2
Defline:  (1 of 3) K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene14958 Secondary Identifier:  ? PAC:35961900
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7560 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14958 0.5kb upstream 0.5kb upstream 5039 true Tp57577_TGAC_v2_scaf_591: 88227-93265 Trifolium pratense
Tp57577_TGAC_v2_gene14958 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_591: 92766-93265 Trifolium pratense
Tp57577_TGAC_v2_gene14958 0.5kb downstream 0.5kb downstream 5039 true Tp57577_TGAC_v2_scaf_591: 87727-92765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_591: 87727-88226 Trifolium pratense
Tp57577_TGAC_v2_gene14958 1.0kb upstream 1.0kb upstream 5539 true Tp57577_TGAC_v2_scaf_591: 88227-93765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_591: 92766-93765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 1.0kb downstream 1.0kb downstream 5539 true Tp57577_TGAC_v2_scaf_591: 87227-92765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_591: 87227-88226 Trifolium pratense
Tp57577_TGAC_v2_gene14958 2.0kb upstream 2.0kb upstream 6539 true Tp57577_TGAC_v2_scaf_591: 88227-94765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_591: 92766-94765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 2.0kb downstream 2.0kb downstream 6539 true Tp57577_TGAC_v2_scaf_591: 86227-92765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_591: 86227-88226 Trifolium pratense
Tp57577_TGAC_v2_gene14958 5.0kb upstream 5.0kb upstream 9539 true Tp57577_TGAC_v2_scaf_591: 88227-97765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_591: 92766-97765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 5.0kb downstream 5.0kb downstream 9539 true Tp57577_TGAC_v2_scaf_591: 83227-92765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_591: 83227-88226 Trifolium pratense
Tp57577_TGAC_v2_gene14958 10.0kb upstream 10.0kb upstream 14539 true Tp57577_TGAC_v2_scaf_591: 88227-102765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_591: 92766-102765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 10.0kb downstream 10.0kb downstream 14539 true Tp57577_TGAC_v2_scaf_591: 78227-92765 Trifolium pratense
Tp57577_TGAC_v2_gene14958 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_591: 78227-88226 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310498 5265 Fabidae View MSA
124069132 5270 Rosid View MSA
123739716 5271 Pentapetalae View MSA
122785691 5272 Eudicot View MSA
122043887 5273 Angiosperm View MSA
121350299 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain